| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3900 |
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| Symbol | |
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| ID | 6411580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4187110 |
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| End bp | 4187874 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642713782 |
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| Product | putative transcriptional regulator, Crp/Fnr family |
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| Protein accession | YP_001992873 |
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| Protein GI | 192292268 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGGCA GTCAATCAGC CAACGACCTG CTTGCGGCTT TGCCTGCGGC AGACTTTGAA
CTGCTGCGGC CGCATCTGCG CACGATCGAC TTGAAATTCG GTCAGGTTCT GGTCGAGGCG
GGGGCACCGC TCGAACAGGC GATTTTCCCT CACGGCGGCA TCATCTCCAG CGTGATCGGC
CTCGGCAAGG ACGAGGCGAT CGAGCTGGCG GCAATCGGCC GGGATGGCGC TGTTGGTGCA
GAGGCGGCGC ACGAGACGGT GGCGGCTGTC GGCGCCGTGG TTCGCTATCC GACGACGGCA
TCTGCAATCG AGGTGATGCA CTTCCGCTAC GCCGTCGACC ACAGCGCGAC GTTGCGCAGC
CTGCTGCTGC GCTATCAGTG GATCCGCGCG GTGAGGGCCG AACGCGTCGC AGCTTGCAAC
GCCGCGCACT CCGCCGAAGC GCGGCTGTGC CGCCGCCTGC TGCAATCGCG CGATATGGCC
GGAAGCGACT GCATGCAGCT CGGTCAGGAT CTGATGGCCC AGATGCTCGG GGTCAAACGC
AACACGATTT CGCTGATCGC TCACGCTCTC CAGCAGCAGG GACTGATCCG CTACAGCCGC
GGCCGCTTGG CGATCACCGA TGTCGATGGC CTGATGCTCC GCGCTTGCGC CTGCTACAAG
ACCGATCGCG GCGGCTTTGC CGCAACGGCG GTTGAGCGTC AGCCGGTCGT GGCGATCCCG
CGGCTCGCGT CGGACTACGC CGAGTCCCCG CGGCTGCCCT CGTAG
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| Protein sequence | MAGSQSANDL LAALPAADFE LLRPHLRTID LKFGQVLVEA GAPLEQAIFP HGGIISSVIG
LGKDEAIELA AIGRDGAVGA EAAHETVAAV GAVVRYPTTA SAIEVMHFRY AVDHSATLRS
LLLRYQWIRA VRAERVAACN AAHSAEARLC RRLLQSRDMA GSDCMQLGQD LMAQMLGVKR
NTISLIAHAL QQQGLIRYSR GRLAITDVDG LMLRACACYK TDRGGFAATA VERQPVVAIP
RLASDYAESP RLPS
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