Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3822 |
Symbol | |
ID | 6411500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 4104651 |
End bp | 4105955 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642713703 |
Product | hypothetical protein |
Protein accession | YP_001992796 |
Protein GI | 192292191 |
COG category | [S] Function unknown |
COG ID | [COG4325] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGTCGA CTGCGTCGAA AGCGCGCTCC TTCCTTTCGG CTGCCCAGCT ACTCAGCTCT TGGGACCGGG CGCGTAGCAG CTTTTGGTTC TTGCCTACCG TGATGGCAGC GCTGGCGATC GGCCTGTCGT TCGGACTGAT TGAGGTCGAC AACTGGCTCG GTAGCGGGAC GGTCGGCGAT ATCGAATACC TCTATCTGTT CGGACCAGAA GGAGCCCGGG CGATTCTGTC GACCATCGCC AGTTCGATGA TTACGGTTGC AGGCCTGACC TTCTCCATCA CCATGCTGAC GCTGCAGCTC GCCTCATCGC AATTTGGTCC GCGATTGCTG CGCAACTTTA TGCGTGATCG CGGAAATCAG CTCGTTCTTG GTACTTTCAT ATCGACCTTC GTTTACTGCT TGCTGGTGTT GCGTACCGTG CGGGGAGTCG AGGGATCGAG TTTTGTTCCG CATCTAGCGG TCGCCTTTGG CGTCTTAATG GCGTTGGCGA GCCTCGGCGT GCTGATCTAT TTCATCCATC ACATTGCTTC CAGTATTCGA ATCGAGTCGC TGCTGACCGA GCTCGCAAGT GAAACTCGCG CCACCATCGC GCGGATGTAT CCCGAACGCC TCGGTCGCGA CGCCAAGGAG ACCCCAGAGA TATTCGCGCA GCCATCAGAT TTCGACGTGT CTTCGGCACC AGTGACGGCA ACTCGCAGCG GCTATCTTCA GCGCATCGAC GTCGACATGC TTATGCAGCT GGCCACCGAG AACGATCTCG TCCTGAGGGT GGAGGCGCCT CCCGGGCGGT TCGTCATCGG CAACGACGCC ATCTTGCGCA TGCATCCGAA GTCACGGGGC ACCGATGAAA TCATCTCACG GCTGCGTTCC AGTTTCATCA TCGGCGAGGA GAGGACGCCC GATCAGGATT TGCACTTTTC GGTTCGCCGC ATCGTCGAAA TCGCGCAGCG CGCGCTTTCT CCGGGGGTCA ATGATCCGAC CACTGCCCTG TACTGCATTG ACCGTCTGCG AGAGATCTTT GTCCTGCTCG CCGGCCGCGA CCTTCCTTCG GCTCAGCGCG TGGATAAGGA CGGCAATCTG CGGGTTGTTA CCGATGTGGT GACGTTGGAC ACACTGGCCG GCGATACGTT CTCGGCGGTC GCCCATTACG GAATTGAGGA CTCCGACGTC GTCCAGCACC TGATCTACGC CATCGAAAGT GTAACCAATC TGGGTTCATC GGCGGATAAT TGCGAGGCTC TTCGTCGCCT TGGTGGGTTG CTACGTAGCC GACGCGAATA CCAATTAGCT CGTCCATTCG ATTAA
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Protein sequence | MTSTASKARS FLSAAQLLSS WDRARSSFWF LPTVMAALAI GLSFGLIEVD NWLGSGTVGD IEYLYLFGPE GARAILSTIA SSMITVAGLT FSITMLTLQL ASSQFGPRLL RNFMRDRGNQ LVLGTFISTF VYCLLVLRTV RGVEGSSFVP HLAVAFGVLM ALASLGVLIY FIHHIASSIR IESLLTELAS ETRATIARMY PERLGRDAKE TPEIFAQPSD FDVSSAPVTA TRSGYLQRID VDMLMQLATE NDLVLRVEAP PGRFVIGNDA ILRMHPKSRG TDEIISRLRS SFIIGEERTP DQDLHFSVRR IVEIAQRALS PGVNDPTTAL YCIDRLREIF VLLAGRDLPS AQRVDKDGNL RVVTDVVTLD TLAGDTFSAV AHYGIEDSDV VQHLIYAIES VTNLGSSADN CEALRRLGGL LRSRREYQLA RPFD
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