| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3718 |
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| Symbol | |
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| ID | 6411395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3978609 |
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| End bp | 3979961 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642713599 |
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| Product | branched-chain amino acid ABC transporter, periplasmic binding protein, putative |
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| Protein accession | YP_001992693 |
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| Protein GI | 192292088 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.203284 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGACA AGAAATTTAT CATCGACCGC AGAACTGCGC TCAAGACCGG CCTGGCCGGT
GCTGCCGCCC TCGCGACGCC GAGCTTTTTC ATCCGCGACG CCTGGGCCGA CGATTTCTGC
AACATCCCGA AGGGCAAGGA AGTCGTTTTC GGCTTCAACG TTCCGCAGTC CGGTGCCTAT
GCCGACGAAG GCATGGACGA ACTCAAGGCT TATCAGCTCG CGGTCAAGCA CCTCAACGGT
GAGGGCGACG GTGGCATGCT GAAGACCATG AAGCCGCTGG CGCTCAAGGG TAACGGCGTG
CTCGGCAAGA AGGTCACCTT CGTCTCCGGT GATACCCAGA CCAAGGCCGA TCAGGCGCGC
GCCACCGCCA AGCGCATGAT CGAAAAGGAC GGCGCGATCA TGATCACCGG CGGCTCGTCG
TCGGCCGAAG CGGTCGCGGT GCAGTCACTG TGCCAGGACG TCGGTGTGAT CTTCATGGCC
GGCCTGACCC ACTCCAACGA CACCACCGGC AAGGACAAGC GCGCCTACGG CTTCCGCCAC
TTCTTCAACG CCTACATGTC CGGCGTCGCG CTCGGCCCGG TGCTCGCCGA GGCCTACGGC
AAGGATCGTG CGGCGTATCA CCTGACCGCC GACTACACCT GGGGCTGGAC CCAGGAAGAG
TCGATGAAGG ACGCCACCGA GAAGCAGGGC TGGAAGACCG TCAAGGCGGT CCGCACGCCG
CTCGGCGCCG CCGACTTCTC GCAGTACATC ACCCCGGTGC TGAACTCCGG CGCCGACGTG
CTGATCCTGA ACCACTACGG CAAGGACATG ATCAACTCCT TGACCCAGGC GGTGCAGTTC
GGCCTGCGCG ACAAGATGGC GAACGGCAAG AAGTTCGAGA TCGTCGTGCC GCTGTTCTCC
GAGTTGATGG CGCAGGGCGC CGGCGACGCG ATCAAGGGCA TCTACGGCAC CGCGAACTGG
GACTGGAAGC TCGAAGACGC CGCCACCAGC GCCTTCACCA AGTCGTTTGG CGCCGCCTAC
GGCACTCCGC CGTCGCAGGC CGCGCAGACC TGCTACGTCC AGGCGATCCT GTATGCGGAC
GCCGTCGAGC GTGCCGGTAC TTTCAATCCG TCGAAGGTGA TCGCGGCCCT CGAAGGCTTC
GAGTTCGACG GTCTCGGCAA CGGCAAGACG CTGTATCGCG CCGCCGACCA TCAGTGCTTC
AAGGACGTGC TGGTGGTGCA GGGCAAGGAA AAGCCAAAGG ACAAGTTCGA TCTGCTCGAA
GTCAAGAAGA TCGTGCCCGC GTCGCAGGTC ACCTACGATC CGAGCATCTT CGGCGGCGAA
CTGGGCTCCA AGGACGCCAA GGCGTGCGGC TGA
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| Protein sequence | MADKKFIIDR RTALKTGLAG AAALATPSFF IRDAWADDFC NIPKGKEVVF GFNVPQSGAY
ADEGMDELKA YQLAVKHLNG EGDGGMLKTM KPLALKGNGV LGKKVTFVSG DTQTKADQAR
ATAKRMIEKD GAIMITGGSS SAEAVAVQSL CQDVGVIFMA GLTHSNDTTG KDKRAYGFRH
FFNAYMSGVA LGPVLAEAYG KDRAAYHLTA DYTWGWTQEE SMKDATEKQG WKTVKAVRTP
LGAADFSQYI TPVLNSGADV LILNHYGKDM INSLTQAVQF GLRDKMANGK KFEIVVPLFS
ELMAQGAGDA IKGIYGTANW DWKLEDAATS AFTKSFGAAY GTPPSQAAQT CYVQAILYAD
AVERAGTFNP SKVIAALEGF EFDGLGNGKT LYRAADHQCF KDVLVVQGKE KPKDKFDLLE
VKKIVPASQV TYDPSIFGGE LGSKDAKACG
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