Gene Rpal_3688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3688 
SymbolrplL 
ID6411364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp3947573 
End bp3947950 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content63% 
IMG OID642713568 
Product50S ribosomal protein L7/L12 
Protein accessionYP_001992663 
Protein GI192292058 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0222] Ribosomal protein L7/L12 
TIGRFAM ID[TIGR00855] ribosomal protein L7/L12 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGATC TGCAGAAGAT TGTTGACGAC CTCTCGAGCC TCACCGTGCT CGAAGCCGCT 
GAGCTCGCCA AGTTGCTCGA AGAGAAGTGG GGCGTTTCGG CCGCTGCGGC CGTCGCGGTT
GCCGCTGCTC CGGGCGCCGG TGGCGCCGCT GCTCCGGCGG AAGAGAAGAC CGAGTTCACC
GTTGTCCTGG CCTCGGCTGG CGACAAGAAG ATCGAGGTGA TCAAGGAAGT CCGCGCCATC
ACCGGCCTGG GCCTCAAGGA AGCCAAGGAT CTGGTCGAAG GCGCTCCGAA GCCGCTCAAG
GAAGGCGTCA ACAAGGAAGA AGCCGAGAAG GTCAAGGCCC AGCTCGAGAA GGCTGGCGCC
AAGGTCGAGC TCAAGTAA
 
Protein sequence
MADLQKIVDD LSSLTVLEAA ELAKLLEEKW GVSAAAAVAV AAAPGAGGAA APAEEKTEFT 
VVLASAGDKK IEVIKEVRAI TGLGLKEAKD LVEGAPKPLK EGVNKEEAEK VKAQLEKAGA
KVELK