| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3664 |
|---|
| Symbol | rplB |
|---|
| ID | 6411340 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 3913962 |
|---|
| End bp | 3914798 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642713544 |
|---|
| Product | 50S ribosomal protein L2 |
|---|
| Protein accession | YP_001992639 |
|---|
| Protein GI | 192292034 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0090] Ribosomal protein L2 |
|---|
| TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTGA AGACCTTTAA TCCCACGACG CCGGGCCAGC GCCAGCTGGT GATGGTTGAT
CGTTCGGCGC TGTACAAGGG CAAGCCGGTC AAGCGGCTGA CCGAGGGCAA GAACTCGAAC
GGCGGTCGTA ACAACACCGG CCGTATCACC GTTCGGTTCC GCGGCGGCGG TCACAAGCAG
GCTTATCGTC TGGTCGATTT CAAGCGCACC AAGGTCGACG TTCCGGCCAA GGTCGAGCGT
CTGGAGTACG ATCCGAACCG CACCGCCTTC ATCGCGCTGA TCAAGTACGA GGACGGCGAG
CAGGCTTACA TCCTCGCTCC CCAGCGCCTG GCGGTCGGCG ACACCGTGAT CGCGGGCGCC
TATGTCGACG TGAAGCCGGG CAACGTGATG CCGCTGGGCA ACATGCCGAT CGGCACCATC
GTGCACAACG TCGAGCTGAA GATCGGCAAG GGCGGCCAGC TGGCCCGTTC GGCCGGCACC
TACGCTCAGA TCGTCGGCCG CGACCACGAC TACGTGATTC TGCGCATGAA CTCGGGCGAG
CAGCGCCTGA TTCACGGTCG CTGCATCGCG GCGATCGGTG CGGTGTCGAA CCCGGACCAC
ATGAACATCT CGATCGGCAA GGCCGGTCGC AAGCGCTGGC TCGGCCGTCG CCCGCACAAC
CGTGGCGTCG TCATGAACCC GATCGACCAC CCGCACGGCG GCGGTGAAGG CCGCACCTCG
GGCGGCCGTC ACCCGGTCAC CCCGTGGGGC AAGCCGACCA AGGGTAAGAA GACCCGTTCG
AACAAGTCGA CCGACAAGTT CATCCTCATC AGCCGCCACA AGCGGAAGAA GAAGTAA
|
|---|
| Protein sequence | MALKTFNPTT PGQRQLVMVD RSALYKGKPV KRLTEGKNSN GGRNNTGRIT VRFRGGGHKQ
AYRLVDFKRT KVDVPAKVER LEYDPNRTAF IALIKYEDGE QAYILAPQRL AVGDTVIAGA
YVDVKPGNVM PLGNMPIGTI VHNVELKIGK GGQLARSAGT YAQIVGRDHD YVILRMNSGE
QRLIHGRCIA AIGAVSNPDH MNISIGKAGR KRWLGRRPHN RGVVMNPIDH PHGGGEGRTS
GGRHPVTPWG KPTKGKKTRS NKSTDKFILI SRHKRKKK
|
|---|
| |