| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3614 |
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| Symbol | |
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| ID | 6411290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3871374 |
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| End bp | 3872213 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642713494 |
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| Product | formate/nitrite transporter |
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| Protein accession | YP_001992589 |
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| Protein GI | 192291984 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2116] Formate/nitrite family of transporters |
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| TIGRFAM ID | [TIGR00790] formate/nitrite transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.568549 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCTACC TCGCGCCTTC TGAATTCGTC ACCAAGATGG TCGACGCTGG CGAGTCCAAG
ATCTTCATGT CCACCCGCGA CACGGTGATC CGTGCCTATA TGGCCGGCGC CATTCTGGCG
CTTGCCGCGT GGTTCGCGAT CACAATCAAC GTCAACACCG GGCAGCCGCT GATCGGCGCG
CTGCTGTTTC CGGTCGGCTT CACGATGTTG TACTTGCTCG GTTTCGACCT GCTGACGGGC
GTGTTCGTGC TGTCGCCGCT GGCGTGGCTC GACAAGCGTC CCGGCGTGAC GATCGGCGGC
GTGCTGCGCA ACTGGGGCCT GGTATTCATC GGAAATTTCG CCGGCGCGCT GACGGTGGCG
TTCCTGATGG CGTTCGTGAC GACGTTCGGC TTCACCCAGG ATCCCGACAA GGTCGGCACG
GCGATCGGCA ATATCGGCGA GGGGCGGACG CTCGGCTATG CGGCGCACGG CGCGGCCGGC
ATGGTGACGC TGTTCTTCCG CGGCATGCTG TGCAACTGGA TGGTGTCGAC CGGCGTCGTG
ATGGCGATGA TTTCAACCAC GGTGCCGGGC AAGGTGCTGG CGATGTGGAT GCCGATCCTG
GTGTTCTTCT ACATGGTGTT CGAACATTCG GTGGTGAACA TGTTCCTGTT TCCGTCGGGC
CTGATGCTGC ACGCCAAGTT CTCGATCCTC GACTACCTGA TCTGGAACGA GATCCCGACC
GTGCTCGGCA ATCTGGTTGG CGGTCTCGCC TTCACCGGGC TGACGCTCTA CACCACGCAT
GTCCGCACTG GTGCGAAGCG CCGGATCGAA GCTGTTCCGG CGCCGCGCGT CGCGGCGTAA
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| Protein sequence | MSYLAPSEFV TKMVDAGESK IFMSTRDTVI RAYMAGAILA LAAWFAITIN VNTGQPLIGA
LLFPVGFTML YLLGFDLLTG VFVLSPLAWL DKRPGVTIGG VLRNWGLVFI GNFAGALTVA
FLMAFVTTFG FTQDPDKVGT AIGNIGEGRT LGYAAHGAAG MVTLFFRGML CNWMVSTGVV
MAMISTTVPG KVLAMWMPIL VFFYMVFEHS VVNMFLFPSG LMLHAKFSIL DYLIWNEIPT
VLGNLVGGLA FTGLTLYTTH VRTGAKRRIE AVPAPRVAA
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