Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3576 |
Symbol | |
ID | 6411250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 3825823 |
End bp | 3826254 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642713454 |
Product | hypothetical protein |
Protein accession | YP_001992551 |
Protein GI | 192291946 |
COG category | [S] Function unknown |
COG ID | [COG5642] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02293] putative toxin-antitoxin system antitoxin component, TIGR02293 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCATCA TCGAAACCGT CGCCGATAAG CTCGGCGGCA AGCCAGTACT TGGTGCAACA GTTCGGTCGC AGGCGGACTT GGCGATGGTG GTCCGAAATC GGCTCCCCCT CGCCGCCCTC CAAGGACTGA GCCGCGCCGG GCTGAGCGAT CAGGAGATCG AACAGTTCGT CATCCCGCAG CGAACTCGGC GACATCGAGC CGAACGCAAT CAGCCGCTCA CGATCGACGA ATCCGACCGC GCCGTCCGCT TGCTGCGCAT TCAGAGTCTT GCCGAAGACA CCTTCGGCGG CGTGGACAAG GCCAGCCTCT GGCTTCGACG CCCTCTGGCT GAGCTGAACG GCGAAACACC CCTGACCGTC GCGCAAACCG AGGCTGGCGC CAGGCTGATC GAGATGGTGC TCGGCAAGAT CGCTTGGGGC GCAGCCGCCT GA
|
Protein sequence | MSIIETVADK LGGKPVLGAT VRSQADLAMV VRNRLPLAAL QGLSRAGLSD QEIEQFVIPQ RTRRHRAERN QPLTIDESDR AVRLLRIQSL AEDTFGGVDK ASLWLRRPLA ELNGETPLTV AQTEAGARLI EMVLGKIAWG AAA
|
| |