Gene Rpal_3576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3576 
Symbol 
ID6411250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp3825823 
End bp3826254 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content64% 
IMG OID642713454 
Producthypothetical protein 
Protein accessionYP_001992551 
Protein GI192291946 
COG category[S] Function unknown 
COG ID[COG5642] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02293] putative toxin-antitoxin system antitoxin component, TIGR02293 family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATCA TCGAAACCGT CGCCGATAAG CTCGGCGGCA AGCCAGTACT TGGTGCAACA 
GTTCGGTCGC AGGCGGACTT GGCGATGGTG GTCCGAAATC GGCTCCCCCT CGCCGCCCTC
CAAGGACTGA GCCGCGCCGG GCTGAGCGAT CAGGAGATCG AACAGTTCGT CATCCCGCAG
CGAACTCGGC GACATCGAGC CGAACGCAAT CAGCCGCTCA CGATCGACGA ATCCGACCGC
GCCGTCCGCT TGCTGCGCAT TCAGAGTCTT GCCGAAGACA CCTTCGGCGG CGTGGACAAG
GCCAGCCTCT GGCTTCGACG CCCTCTGGCT GAGCTGAACG GCGAAACACC CCTGACCGTC
GCGCAAACCG AGGCTGGCGC CAGGCTGATC GAGATGGTGC TCGGCAAGAT CGCTTGGGGC
GCAGCCGCCT GA
 
Protein sequence
MSIIETVADK LGGKPVLGAT VRSQADLAMV VRNRLPLAAL QGLSRAGLSD QEIEQFVIPQ 
RTRRHRAERN QPLTIDESDR AVRLLRIQSL AEDTFGGVDK ASLWLRRPLA ELNGETPLTV
AQTEAGARLI EMVLGKIAWG AAA