| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3575 |
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| Symbol | |
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| ID | 6411249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3824418 |
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| End bp | 3825737 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642713453 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001992550 |
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| Protein GI | 192291945 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCTGAAC GTTCGTTGCG GATTTCCTCT CTCGTTGGTG CGGCTTGCGT CGCCGCCACA
CTCGCCCTCC AGCCCCATCA GGCCCACGCG GCAAGCTGCC CCGGCAATCC CGATGCGCTC
GGCACATCGC GTACGCTGGT CGTCGATCCG CGCGAACATC CGCGCATCGG CACGATGCAA
TATAGCGAGA CCCTGCCGCT GCGCGACCAC GAGGTGGTGC TGACATTCGA CGACGGCCCG
CTGCCGCGCG AAAGCAATCA GGTGCTCGAC ATCCTGGCCA AGGACTGCGT CAAGGCGACG
TTCTTCGTGG TCGGGCGGAT GGCGAAGACG TTTCCAGCCG GTGTCCGCAA GCTGCGCGAC
GCCGGCCACA CCATCGGCAC CCACAGCCAG AATCATCCGC TGAGCTTCAA CCGGATGTCG
GTGGAGCAGG CCCAGCAGGA GGTCGACGAA GGCATCGCCT CGACCCTCGC CGCCCTCGAC
GGTGACCGCG CCGCGCTGTC GCCGTTCTTC CGTATTCCCG GCCTGCTGCG AGCCGAAGCG
GTCGAAGGAT ACCTCGCTTC CCGCGGCATC CAGGCGTGGA GCGCGGACTT CCCGGCCGAC
GACTGGCGTC ATGTCTCACC CGACACCGTG TATCATCTGG CGATGAGCCG GCTGGCCGCG
AAGGGCAAGG GTATCCTGTT GCTGCACGAC ATCCAGCCGC GCACGGTGGG GGCGCTGCCG
CGGATCCTGC AGGCGCTGAA GGCCGGCGGC TACAAGATCG TGCACGTGGT CGCAGCGACG
CCGGAGCTGC CGAAGACGCC GACCGAGCCG CAAGAGTGGC GGCTGCATCC GGTTTCGGAA
ACCGTGGCGA AGGTGCGTTG GCCAAAGGTG CCGCGCTTCG TGTTCGCAAA TGAAGAGATG
CTGCCCGCCC CCGAACTCGC CGACATCGGC CTCGACCGCG ACCGCCTGAT TCCAGGCAGC
GCCCCGATCC GGTCGAATCG TCTCGCGCGT GGCCAGGTGC CGACGCCGCA GCGCTCGCCG
TGGCCGCGGC AGGCCCTGAT CGAATCGCCC GACAATCTGA TCAGCCTGCC GGTGCCGTCG
CCGAGCCTGT TTGCAATTCC TGAACGGAAC GCTCCGGCAA TTCGGGCGAT GGTCCCGGTG
AAGGCGGAAC GCGCCGCCCG CGAAACGCCG CAGCTCGTCC GCGACGCGAA CAACCGGACG
CTGTCGATCG ACGTCGGCGC CGCCGCGCGC CCGATCTCCG GCAGCGTAGG GATTGCCCCG
GAAGGCCTAC AGCGGGGCCC GCTCGACGCC GGCAGCCGCC CTCGCCCGCT CAATCATTGA
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| Protein sequence | MSERSLRISS LVGAACVAAT LALQPHQAHA ASCPGNPDAL GTSRTLVVDP REHPRIGTMQ
YSETLPLRDH EVVLTFDDGP LPRESNQVLD ILAKDCVKAT FFVVGRMAKT FPAGVRKLRD
AGHTIGTHSQ NHPLSFNRMS VEQAQQEVDE GIASTLAALD GDRAALSPFF RIPGLLRAEA
VEGYLASRGI QAWSADFPAD DWRHVSPDTV YHLAMSRLAA KGKGILLLHD IQPRTVGALP
RILQALKAGG YKIVHVVAAT PELPKTPTEP QEWRLHPVSE TVAKVRWPKV PRFVFANEEM
LPAPELADIG LDRDRLIPGS APIRSNRLAR GQVPTPQRSP WPRQALIESP DNLISLPVPS
PSLFAIPERN APAIRAMVPV KAERAARETP QLVRDANNRT LSIDVGAAAR PISGSVGIAP
EGLQRGPLDA GSRPRPLNH
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