| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3548 |
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| Symbol | |
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| ID | 6411222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3797175 |
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| End bp | 3798404 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642713426 |
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| Product | protein of unknown function DUF482 |
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| Protein accession | YP_001992523 |
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| Protein GI | 192291918 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3146] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.459173 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACGGCAT CCTCCGACAT CACGCTGGAA GCGGTGTCCT CGGTGGATGC AATTGCCGCC
GCCGACTGGG ATGCCTGTGC GCGCTCCGGG ACCATCGTCC CTCATCCGGA GGGAGCCGGC
GGCGCCTGCA CCAACGCGAC AGCCGCCTAC AATCCGTTTC TCAGCCACGC GTTCTTCACC
GCGCTCGAAC AGTCGGGATC GGCGAGTCCC CGCACCGGCT GGGGACCGCG GCATCTGATC
GCGAAGCACG AAGGCGCGAT CGTCGGCATC GTGCCGTGCT ATCTGAAGTC GCATTCGCAG
GGCGAATACG TGTTCGACCG CGGCTGGGCC GATGCCTATG AGCGCGCCGG CGGCAACTAC
TATCCGAAGC TGCAAGTCTC GGTGCCGTTC ACCCCCGCGA CCGGGCCGCG GCTGCTGATC
CGCGACGGCA TCGATTCCGC GCGCGTCGCG GGCGCATTGG CGAACGGGCT GATGGCGCTG
TGCGATCTCA GCAAGGCGTC GTCGGTGCAT GTCACCTTCG CGCGCGAGAG CGAATGGCGA
TTTCTCGCCG AGCGCGGCTT TCTGCAACGC ACCGATCAGC AGTTTCACTG GCACAATGCC
GGCTATTCCA GCTTCGACGA CTTCCTGGCG ACGATGAACT CGCGTCATCG CAAGGGGATC
AAGCGCGAGC GGCGCGACGC GGTGGCAAGC GGCATCACCA TCCACCACCT CACCGGCGCC
GACATTACCG AAGATGCCTG GGATGCGTTC TTCGAGTTCT ACATCGAGAC AGGCTCGCGC
AAATGGGGAC GGCCCTATCT GACCAGGGAG TTCTATTCCC TGATCGGCCA GAGCATGAGC
GAGGACGTGC TGCTGGTGAT GGCGAAGCGC AACGGCCGCT GGATTGCCGG GGCAATCAAC
TTCATCGGCG GCGACACTCT GTTCGGCCGT CACTGGGGCG CGATCGAGCA TCACCCGTTT
CTGCACTTCG AGGTGTGCTA CTATCAGGCC ATCGACTTTG CGATCACGCG CGGCCTCAAG
GTGGTCGAAG CCGGCGCACA GGGCGAGCAC AAGATCGCAC GTGGCTATCT GCCGCAGACC
ACCTACTCGG CGCACTTCAT CGCAGACCCG GCACTGCGCC GTGCGATCGC CGATTATCTG
AAGCGCGAAC GAATGTATGT CGACGAGATG GGCCGCGAAC TGACCGAGGC CGGTCCTTTT
AAAAAAGGTA ACATCGCCGA TCCGGCTTGA
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| Protein sequence | MTASSDITLE AVSSVDAIAA ADWDACARSG TIVPHPEGAG GACTNATAAY NPFLSHAFFT
ALEQSGSASP RTGWGPRHLI AKHEGAIVGI VPCYLKSHSQ GEYVFDRGWA DAYERAGGNY
YPKLQVSVPF TPATGPRLLI RDGIDSARVA GALANGLMAL CDLSKASSVH VTFARESEWR
FLAERGFLQR TDQQFHWHNA GYSSFDDFLA TMNSRHRKGI KRERRDAVAS GITIHHLTGA
DITEDAWDAF FEFYIETGSR KWGRPYLTRE FYSLIGQSMS EDVLLVMAKR NGRWIAGAIN
FIGGDTLFGR HWGAIEHHPF LHFEVCYYQA IDFAITRGLK VVEAGAQGEH KIARGYLPQT
TYSAHFIADP ALRRAIADYL KRERMYVDEM GRELTEAGPF KKGNIADPA
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