| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3516 |
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| Symbol | |
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| ID | 6411190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3764416 |
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| End bp | 3765522 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642713395 |
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| Product | signal transduction histidine kinase |
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| Protein accession | YP_001992492 |
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| Protein GI | 192291887 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3920] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.135584 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCTG ACGACGTCCA AGGTCCACCG CAAGGTCTCG ATCAGATCCT CGGATCGCCA
AAGCTGGCCG CGGCGATCGA GAGCGATCGC TACAAGCACC TGCTGGACAA TGTGCCGGTG
GCGATCGCGG TGTCGCGAGG CTGCGGCGAG GGCCAGCGGA TCGTCTATAT CAATCAGGCG
TTCGAGGCGC TGACAGAGCT GTCTAAGGCC GATGTCGACG GCCGAGGCTG GTCTTGCCTC
GACGACTTTT CTGACCACGA TGACACTGGC CGCGCGCTCG GCGCCACGAT CCGTGACGAC
GAAGATTTCC TTGGTGTATT CCGCAAGACC GCGCCATCGG AGCGGCTGCT GATCGTCCAG
GCCTATGCGG CGGTGATCGA AAGCGACGAC GGCGTCGAGA ACTATCGGAT TGTTGCACTG
GTCGACGTCG GCGGCCGCGA GCGGGCGCAG ATCGAGCGGT TCGAAAGTCA GATCCGCGAG
CGCGACACCC TGATGCGCGA GCTGCAGCAT CGGGTGAAAA ACAATCTGCA GCTGATTACC
GCCCTGATCC GGCTCGAAGC GCGCTCTGCC GCGGAAGGCG AGACCGTGGC GCTGGCGCGA
CTCGCCAGCC GGATCGATGC GCTGACCGCG CTGTACCGTG TGTTGTCGGA CGAGACCCCG
AGCGCCGACG CCGGGCAGAT CGATCTCGGC CAGTATCTCT CAGATATCGC CAACGCGGTG
ATCCGCGCCA ACGCCGCCGG CGAGATCAAT TGCGAGGTGC ATGCCGACTA TTGCCCGCTA
TCGGTCAACA TCGCGATGCC GGCCGGGCTG CTGGTCAACG AGATGCTGAC CAACGCGCTG
AAATACGCCT TCGTCGGCCG CGACGCCGGA CGGATCAAGG TGATCTGCGA GACCGATCAG
GGCCGTGTCA GGATCATGGT GTCGGATGAT GGCGCCGGCC TTCCCGACGG GCAGAGCTGG
CCGTCGCCGC GAAAGCTTGG CGCGCTGATC CTGCAGACGC TGAAGGAGAA CGCCCGCAAC
GTCAGTTTCG AAGCGCGCAG CATTCGCGGG CAGGGTGCGT TCTTCACCAT CGGCTTCGAT
GCGCCATCCC CGCGCGCTGC GAATTGA
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| Protein sequence | MSADDVQGPP QGLDQILGSP KLAAAIESDR YKHLLDNVPV AIAVSRGCGE GQRIVYINQA
FEALTELSKA DVDGRGWSCL DDFSDHDDTG RALGATIRDD EDFLGVFRKT APSERLLIVQ
AYAAVIESDD GVENYRIVAL VDVGGRERAQ IERFESQIRE RDTLMRELQH RVKNNLQLIT
ALIRLEARSA AEGETVALAR LASRIDALTA LYRVLSDETP SADAGQIDLG QYLSDIANAV
IRANAAGEIN CEVHADYCPL SVNIAMPAGL LVNEMLTNAL KYAFVGRDAG RIKVICETDQ
GRVRIMVSDD GAGLPDGQSW PSPRKLGALI LQTLKENARN VSFEARSIRG QGAFFTIGFD
APSPRAAN
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