| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3454 |
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| Symbol | |
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| ID | 6411128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3697207 |
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| End bp | 3698685 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642713333 |
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| Product | hypothetical protein |
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| Protein accession | YP_001992430 |
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| Protein GI | 192291825 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0397] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.160092 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGCTC ATTTTCCGTT CGACAACAGC TACGTGGCGC TCCCGCCGAA CTTCTTCGCG
CGGGTTGCGC CGACGCCGGT CGCCGCCCCC CGGTTGATCA AGCTGAACCG CCCGCTCGCG
GTGCAGCTCG GGCTTGATCC GGACCTGCTC GAGACGCCCG AGGGCGCGGA GATTTTATCC
GGTAACCAAA TGCCGGAGAC CGCAGCCTCG ATCGCGATGG CCTATGCGGG CCACCAGTTC
GGCAACTTCG TGCCGCAGCT CGGCGACGGC CGGGCGATCC TGCTCGGCGA GGTGGTCGAC
CGCAACGGGG TTCGCCGCGA TATCCAGCTG AAGGGCGCCG GCCGGACGCC GTTTTCGCGG
ATGGGCGACG GCCGCGCCGC GCTCGGCCCG GTGCTGCGCG AATACATCGT CAGCGAAGCG
ATGGCAGCTC TTGGCATCCC GACCACCCGC TCGCTCGCCG CGGTGCTGAC CGGCGAAACG
GTGCTGCGCG ATCCGATCCA GCCGGGCGCT GTGCTGACGC GGGTGGCCTC CAGCCATATC
CGGGTCGGCA CCTTCCAGTA TTTCGCCGCC CGCGGCGATC TCGCCAGCGT CCGGGCGCTC
GCCGACCATG CCATCGCCCG CCACTACCCG GAGGCGGCTC AGGCGCCCTC GCCTTATTTG
GCCCTGCTCG AAGGCGTGAT CGGCCGTCAG GCGGAACTGG TGGCGAGCTG GATGATGGTC
GGCTTCATCC ATGGGGTGAT GAACACCGAC AACTGCTCGG TTGCCGGCGA GACCATCGAT
TACGGCCCCT GCGCCTTCAT GGACACCTTC GATCCGAAGA CCGTTTACTC CTCGATCGAC
CAGTTCGGCC GTTACGCCTA CGGCAACCAG CCCCCGATCG CCTTGTGGAA CCTGACCCGG
CTGGCCGAAT GCCTGGTCCG GCTATTGGCC GATGACGACG ACAAGGGCAT CGAAATCGCC
CAGACCGCGC TCGGCGGCTT TGCGGAGCGG TTCAACGCCG CGTATCTGGC CAAGCTGGCG
GCCAAGCTCG GCCTGTTCAC CAGCCAGCCG GACGATCAAC AGTTGTCGCA GGAATTCCTG
ACCGCCCTGG CCAAGGGCGA AGCGGACTTC ACCCTCGCCT TCCGCCGGCT GAGCGACGCG
GCTGTCGATC CGTCGGACCT CGGTGAGGTT CGCGCCCTGT TTGCCGATCC GGCGGCGTTC
GACGAGTGGG CCCCGCGGTG GCGCGCCCGG ATCGCAGCCG AGCCGCAGGA TGCAACGACT
CGCCAGGCCG CGATGCGGCG GGTCAACCCG GCCTATACCC CGCGTAATCA CCGGATCGAA
GCGGTGATCC GGGCCGCGGT CGACCGGGAC GATTTCGCTC CCTTCGAAGA GATCCTGACG
GTGCTCGCCA ACCCCTTCGA GGAAAAGGCG GAATTCGCCC GCTATGCGGA GCCGCCGCAG
CCCCATGAAG AGGTGCTGGA AACCTTCTGC GGAACTTGA
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| Protein sequence | MTAHFPFDNS YVALPPNFFA RVAPTPVAAP RLIKLNRPLA VQLGLDPDLL ETPEGAEILS
GNQMPETAAS IAMAYAGHQF GNFVPQLGDG RAILLGEVVD RNGVRRDIQL KGAGRTPFSR
MGDGRAALGP VLREYIVSEA MAALGIPTTR SLAAVLTGET VLRDPIQPGA VLTRVASSHI
RVGTFQYFAA RGDLASVRAL ADHAIARHYP EAAQAPSPYL ALLEGVIGRQ AELVASWMMV
GFIHGVMNTD NCSVAGETID YGPCAFMDTF DPKTVYSSID QFGRYAYGNQ PPIALWNLTR
LAECLVRLLA DDDDKGIEIA QTALGGFAER FNAAYLAKLA AKLGLFTSQP DDQQLSQEFL
TALAKGEADF TLAFRRLSDA AVDPSDLGEV RALFADPAAF DEWAPRWRAR IAAEPQDATT
RQAAMRRVNP AYTPRNHRIE AVIRAAVDRD DFAPFEEILT VLANPFEEKA EFARYAEPPQ
PHEEVLETFC GT
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