| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3442 |
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| Symbol | |
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| ID | 6411116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3684840 |
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| End bp | 3686120 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642713321 |
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| Product | acetylornithine deacetylase |
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| Protein accession | YP_001992418 |
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| Protein GI | 192291813 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATA ACGATCTCCA GCGCCGCATT CTTGATGCCG TCGATGCCGG TTTCGACGAC
CAACTCGCCA CCACGCGTGA CTTCGTTGCG ATCCCCAGCA CGCGCGGGGC CGAGGGCCCC
TGCCAGGACA TGATCGGCGA TCTGCTCCGG CAGCGCGGCT ATGAAGTCGA CGACTGGCAC
ATCGATCTCG ACGATCTCAA GGATCTGCGC GGCTATGGTC CGATCGAGCA TGATTTTTCG
AAAGCGCGGA CGGTGGTCGG GACCTACCGG CCGTCGACCA ATGCCGGCCG ATCGCTGATC
CTGCAGGGAC ATTGCGACGT CGTGCCGGCC GGCCCGCTGG AGATGTGGGA CACCCCGCCG
TTTTCACCGG TGATCAAACA GGGACGGATG TACGGTCGCG GCGCGTGTGA CATGAAGTCC
GGCACCATCG GTGCGTTGTA TGCGCTGGAT GCTATCAAGG CCGCAGGGCT GCGCCCGACC
GGGCGGATCC ACTTCCAGTC GGTGATCGAA GAGGAGAGCA CCGGCGTTGG CGCGCTGTCG
ACGCTGCAGC GCGGCTATCG GGCCGATGCC TGTTTCATCC CCGAGCCGAC TGGCGGCAAG
ATGGTGCGAT CGCAGGTCGG GGTGATCTGG TTTCGGCTGA AGGTGCGCGG CTATCCGGTG
CATGTCGCGA CCGCCGGCAC GGGTTCGAAT GCGATCACCG CCGCCTATCA TTTGATCGAC
GCGCTTGGAA AGCTCGAGGA AGAGTGGAAT CGCCGCGCGG CCAGCGATCC GCATTTCAAG
ACGCTCGCGC ATCCGATCAA CTTCAATCCG GGCATCATCA AGGGCGGGGA CTGGGCGTCC
AGTGTGCCGG CGTGGTGCGA CGTCGATTGC CGCATCGCAA TCCTGCCGGG CTGGTCGGTT
GCTGATCATC AGGCCGAGAT CCTGGCCTGC GTCTCCGCAG CGGCGCGAGA TCATCGCTTC
CTGTCGAACA ATCCGCCCCA GGTGGAGTGG TCGGGCTTTC TGTCGGAAGG CTATGAGCTG
AAAAATGCGG CCGAGCCCGA AGCGGCGTTC GGCAAGGCGT ATCAGGCCGT GTATGGCAGC
GAGGTTGAGG ATCTGGTGTT CACCGCGCTG ACCGATACCC GGTTCTATGG CCTCAACTAC
AACATTCCGA GCCTGTGCTT CGGCGCGTCG GGCGAGGCGA TGCACGGCTT CAACGAGTAC
ATCGATCTGG AGTCGCTGCG GCAATCGACC AAGGCGACTG CGCTGTTCAT TGCCGAGTGG
TGCGGCGTCG AGCCTGCCTG A
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| Protein sequence | MSDNDLQRRI LDAVDAGFDD QLATTRDFVA IPSTRGAEGP CQDMIGDLLR QRGYEVDDWH
IDLDDLKDLR GYGPIEHDFS KARTVVGTYR PSTNAGRSLI LQGHCDVVPA GPLEMWDTPP
FSPVIKQGRM YGRGACDMKS GTIGALYALD AIKAAGLRPT GRIHFQSVIE EESTGVGALS
TLQRGYRADA CFIPEPTGGK MVRSQVGVIW FRLKVRGYPV HVATAGTGSN AITAAYHLID
ALGKLEEEWN RRAASDPHFK TLAHPINFNP GIIKGGDWAS SVPAWCDVDC RIAILPGWSV
ADHQAEILAC VSAAARDHRF LSNNPPQVEW SGFLSEGYEL KNAAEPEAAF GKAYQAVYGS
EVEDLVFTAL TDTRFYGLNY NIPSLCFGAS GEAMHGFNEY IDLESLRQST KATALFIAEW
CGVEPA
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