7 homologs were found in PanDaTox collection
for query gene Rpal_3389 on replicon NC_011004
Organism: Rhodopseudomonas palustris TIE-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011004  Rpal_3389  hypothetical protein  100 
 
 
165 aa  333  7e-91  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.248941  n/a   
 
 
-
 
NC_011894  Mnod_3592  hypothetical protein  44.68 
 
 
146 aa  107  9.000000000000001e-23  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009829  Spro_4940  hypothetical protein  34.19 
 
 
173 aa  84  9e-16  Serratia proteamaculans 568  Bacteria  hitchhiker  0.00000000844553  normal 
 
 
-
 
NC_007406  Nwi_1551  hypothetical protein  41.54 
 
 
130 aa  80.1  0.00000000000001  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.646726  normal 
 
 
-
 
NC_007410  Ava_B0329  hypothetical protein  39.37 
 
 
130 aa  70.1  0.00000000001  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.00304499  n/a   
 
 
-
 
NC_007951  Bxe_A3107  hypothetical protein  37.76 
 
 
157 aa  68.6  0.00000000004  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.000543353  decreased coverage  0.0000114562 
 
 
-
 
NC_008009  Acid345_3177  hypothetical protein  36.84 
 
 
146 aa  63.2  0.000000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
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