| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3356 |
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| Symbol | |
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| ID | 6411030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3610887 |
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| End bp | 3611777 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642713236 |
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| Product | Mu-like prophage major head subunit gpT-like protein |
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| Protein accession | YP_001992333 |
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| Protein GI | 192291728 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4397] Mu-like prophage major head subunit gpT |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGTCA ACTCCGCCAA CCTCAATAAT CTGCGCGTCG GCTTCAAGAC GTCCTTTCAG
GGCGGTCTCG GCCTTGCTCC GTCGCAGTAT CTGCGCGTCA CCACCGTCGT GCCGGCCGCC
ACCAAGGAAC AGAAGTACGG CTGGCTCGGC AAGATGCCGG GCGTGCGCGA GTGGATCGGC
CCGCGCGTCG TGCAGAACCT GTCCGAGCAC GACTACTCCA TCAAGGAGAA GCCGCTGGAA
CTGACCATCG GCGTCGACCG TGACGATATC GAGACCGACA ACCTCGGCAT CTACTCGACG
CTCTTCACCC AGATGGGCGA GTCGACCGGT TCGGCCTGGG AAGAGATGGC CTGGGCGCAG
CTCAAGGCCG GCTTCAGCAA GCCGTGCTAC GACGGCCAGA GCTTCTTCGA TACTGATCAT
CCGGTGCTCG ACGAAAGCGG CGTGGCGCAG AGCGTCGCCA ACACCGACGG GGGCAGCGGC
GCCCCGTGGT TCCTGCTGTG CACCAAGCGC ACGCTGAAGC CGATCATCCT GCAGAAGCGC
AAGGACTTCG AGTTCGTCGC TAAGGACAAG CTGGACGACG ACACCGTATT CAACAACCGC
CAGTTCACTT ACGGCGCTGA CGCGCGGGGC AACACCGGCT TCGGCTTCTG GCAGTTCGCC
TGGGGCTCGA AGCAGACGCT CGACCCGACC CACTACGAGG CCGCTCGCGT CGCGCTCACC
GGCATGAAGG GCGACTACGG TAAGCCGCTC GGCATCGTGC CGGATCTGCT CGTGGTCGGT
TCGTCCAACG AAGGCGCCGG CCGCGCGATC CTGCAGAGTC AGCTGATCAA TGGCGGCGAG
AGCAACAAAT GGGCCGGCAC CGCCGAGCTG CTCGTCGTGC CGTGGCTGTG A
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| Protein sequence | MIVNSANLNN LRVGFKTSFQ GGLGLAPSQY LRVTTVVPAA TKEQKYGWLG KMPGVREWIG
PRVVQNLSEH DYSIKEKPLE LTIGVDRDDI ETDNLGIYST LFTQMGESTG SAWEEMAWAQ
LKAGFSKPCY DGQSFFDTDH PVLDESGVAQ SVANTDGGSG APWFLLCTKR TLKPIILQKR
KDFEFVAKDK LDDDTVFNNR QFTYGADARG NTGFGFWQFA WGSKQTLDPT HYEAARVALT
GMKGDYGKPL GIVPDLLVVG SSNEGAGRAI LQSQLINGGE SNKWAGTAEL LVVPWL
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