Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3323 |
Symbol | |
ID | 6410996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 3580980 |
End bp | 3581969 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642713202 |
Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
Protein accession | YP_001992300 |
Protein GI | 192291695 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGTCCA ATACGAAGAA GCTGCTGGTG ACGGAATCGT TGTCGCAGCG GGGCAGGGCG CTGATCGCCG AACGCGGCGA TATCGAGATG ATCGAATTTC CCAACATGAT CTCGGCGGAG GATTTCGACG CGCTGCTGCG CACTGAAGCG CCGGTGCATG GCGTCGCGCT CGGCGCCACC CGGTTCGGCG AGCGCGAACT CGACGCGGCG CAGCAGATGC GCGTGGTGGC GCGGATCGGC GTCGGCTATG ACGCGATCGA CGTGCCGGCG CTGAACAAGC GCAAGGTGCC GCTGATGACC GCCGGCACCG CGAATTCGCC CTCGGTCGCC GAGCAGGCGC TGTTCATGAT GCTGACGCTT GCCAAGCGCG GCGCCGAGCT GCACGCGCTG GTGAAGACCG GCGCCTGGGC GACGCGGCTC GGGCTGCTGC CGTTCGATCT GTTCGGCAAG ACGGTGCTGA TCGTCGGCTT CGGCCGCATC GGCACCCGCA CCGCCAAGCG CTGCCTGGCG ATGGAAATGA ACGTCGAGGT GTACGATCCC TACGTGCCGG CGGCGGCGAT CGAAGCGGCC GGCTGCAAGC CGGTGTCCGA TCTCGACGCC GCGCTCCCCG ACGCCGATTT CGTCAGCCTG CATTGCCCGA AGACCGCGGA GACCACCGGG CTGTTCGATG CGGCGCGGCT GTCGAAGATG AAGCCGACCG CATACCTCAT CAACACCGCG CGCGGCGGCA TCGTGGTCGA GCAGGCGCTG TACGACGCGC TGCTCGCCGG GAAGCTCGCC GGCGCCGGGC TCGATGTGTT CGAGCAGGAG CCGCCGCCGC ACGGTCACAA GTTGTTCGAT CTGCCCAACG TGATCATCGC GCCGCATGTC GCCGGCGTCA CCCGCGAAGC GCTCGACCGG ATGGGCGAGC AGACTGCCCG CAACATGCTG AGCGTGCTCG ACGGCGACCC GATCCGCGCC AACGTCGTCA ATCAGGATGT GCTCGGTTAG
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Protein sequence | MTSNTKKLLV TESLSQRGRA LIAERGDIEM IEFPNMISAE DFDALLRTEA PVHGVALGAT RFGERELDAA QQMRVVARIG VGYDAIDVPA LNKRKVPLMT AGTANSPSVA EQALFMMLTL AKRGAELHAL VKTGAWATRL GLLPFDLFGK TVLIVGFGRI GTRTAKRCLA MEMNVEVYDP YVPAAAIEAA GCKPVSDLDA ALPDADFVSL HCPKTAETTG LFDAARLSKM KPTAYLINTA RGGIVVEQAL YDALLAGKLA GAGLDVFEQE PPPHGHKLFD LPNVIIAPHV AGVTREALDR MGEQTARNML SVLDGDPIRA NVVNQDVLG
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