| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3282 |
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| Symbol | |
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| ID | 6410952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3531338 |
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| End bp | 3531742 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642713158 |
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| Product | methylmalonyl-CoA epimerase |
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| Protein accession | YP_001992259 |
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| Protein GI | 192291654 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03081] methylmalonyl-CoA epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.587333 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTCGGGC GGCTCAACCA CGTGGCGATC GCGGTGAAGG ATGCGGTGCA GGCCGCCAAG
GTCTACGGCG CCGGCTTCGA CGCGGCGATC TCGGAAGCGG TGCCGCTGCC GGAACACGGC
GTCATCACCG TGTTCGTGAC CCTGCCGAAC ACCAAGATCG AGTTCATCCA GCCGCTCGGC
GAAGCCTCGC CGATCGCCAA GTTTCTCGAG CGCAACGCCG ACGGCGGCAT TCACCACGTC
TGCTACGAAG TGCCGGACAT CATCGAAGCG CGCGACCGCC TGACCAAGGA AGGCGCGCGG
GTGCTCGGCG ACGGCAATCC GAAGATCGGC GCGCACGGCA AGCCGGTGCT GTTCTTCCAT
CCGAAGGATT TCTCCGGCGC GTTGGTCGAG ATCGAACAAG CCTGA
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| Protein sequence | MLGRLNHVAI AVKDAVQAAK VYGAGFDAAI SEAVPLPEHG VITVFVTLPN TKIEFIQPLG
EASPIAKFLE RNADGGIHHV CYEVPDIIEA RDRLTKEGAR VLGDGNPKIG AHGKPVLFFH
PKDFSGALVE IEQA
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