| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3279 |
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| Symbol | |
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| ID | 6410949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3529359 |
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| End bp | 3529898 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642713155 |
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| Product | protein of unknown function DUF461 |
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| Protein accession | YP_001992256 |
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| Protein GI | 192291651 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2847] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01168] Gram-positive signal peptide, YSIRK family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATGT TCATCCGCAG CGTTGCGTCC GTCGCCGTCG CCACCTTGCT GTCCACCGCC
GCCGTGCAGG CCGCCGAGGT CAAGGCCGGC GATCTGGTGA TCAGCCAATC GTGGAGCCGC
GCCACCCCCG GCGGCGCCAA GGTTGCCGGC GGCTTCCTCA CCATCGAGAA CAAGGGCGGC
AGCGCCGACC GTCTGGTGTC CGGCACTGCC GACATCGCCG GCAAGGTCGA GATCCACGAG
ATGTCGATGG ACAACGGCGT GATGAAGATG CGCCCGCTCG ACAAGGGCCT GCCGATCGAG
CCCGGCAAGG CCGTTACGCT GATGCCGGGC AGCTACCACA TCATGCTGAT GGATCTGAAA
GGTCCGCTGA AGCAGGGCGA CAAGGTGCCG ATGACGCTGC AGTTCGAAAA GGCCGGCAAG
GTGCAGGTCA CGCTCGACGT CGAAGGCGTC GGCGCTAAGG CGCCGGGCGA TACCGGCGGC
AGCATGATGA AGATGGACCA CGGCACGATG GATCACAGCG GCCACGGGAT GAAGAAGTGA
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| Protein sequence | MKMFIRSVAS VAVATLLSTA AVQAAEVKAG DLVISQSWSR ATPGGAKVAG GFLTIENKGG
SADRLVSGTA DIAGKVEIHE MSMDNGVMKM RPLDKGLPIE PGKAVTLMPG SYHIMLMDLK
GPLKQGDKVP MTLQFEKAGK VQVTLDVEGV GAKAPGDTGG SMMKMDHGTM DHSGHGMKK
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