| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3274 |
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| Symbol | |
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| ID | 6410944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3523666 |
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| End bp | 3524364 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642713150 |
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| Product | ABC transporter related |
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| Protein accession | YP_001992251 |
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| Protein GI | 192291646 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.991934 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCAGG GCGCCGAAGA CATCCCGGTC GTGTACCTTC ACGACATCAA GCGGCAGTAT
TCGCAAGGCG AGGCGACGCT GACGATCCTC GACGGTGCCA AGCTGGCGCT GTGGGCGGGG
CAGTCGGTAG CGCTGGTGGC GCCGTCCGGT TCGGGCAAGT CGACGCTGCT GCACATCGCC
GGGCTGCTCG AGCATCCCGA TGAGGGCGAG GTCTATGTCG GTGGCGCGGC GACGTCGGCG
CTGACCGATG CCGAGCGCAC CCAGATCCGC CGCACCGATA TCGGCTTCGT CTACCAGTCG
CACCGGCTGC TGCCGGAATT CACCGCGCTT GAAAACGTGA TGCTGCCGCA GATGATCCGC
GGCCTGAAGC GCAAAGAGAC GATCAGCCGC TCCAAGGAAA TCCTGTCCTA TCTGGGGCTC
GCCGATCGCA TCACCCATCG GCCCTCGGAG CTGTCAGGCG GCGAGCAGCA GCGCGTCGCG
ATCGCCCGTG CGGTTGCCAA TGCACCCCGC GTGCTGTTCG CCGACGAGCC GACCGGCAAT
CTCGATCCGC ACACCGCCGA TTACGTGTTC AACGCGCTGA TGCAGCTGGT CAAGGCGACC
CAGGTGGCGA TGCTGATCGC CACCCACAAC ATGGAGCTCG CCGCCCGCAT GGACCGCCGC
GTCTCGCTGC AGGACGGCGT GGTGGTCGAG CTGGAATAG
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| Protein sequence | MEQGAEDIPV VYLHDIKRQY SQGEATLTIL DGAKLALWAG QSVALVAPSG SGKSTLLHIA
GLLEHPDEGE VYVGGAATSA LTDAERTQIR RTDIGFVYQS HRLLPEFTAL ENVMLPQMIR
GLKRKETISR SKEILSYLGL ADRITHRPSE LSGGEQQRVA IARAVANAPR VLFADEPTGN
LDPHTADYVF NALMQLVKAT QVAMLIATHN MELAARMDRR VSLQDGVVVE LE
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