Gene Rpal_3227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3227 
Symbol 
ID6410897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp3473450 
End bp3473725 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content62% 
IMG OID642713103 
Producthypothetical protein 
Protein accessionYP_001992204 
Protein GI192291599 
COG category[S] Function unknown 
COG ID[COG3514] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.364796 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACCTA GATCGAAAGA ACCGGTCTTC GACGACGAAA ATCCTGAGTG GACCGAACAG 
GACTTCGCCA ACGCGCGGCC GCCAGAAGAA ATTCTACCGC CTGAGATCCT GGCGCAGTTC
AAGAACACCC GCGGTCCGCA AAAGGCGCCG ACCAAAGTGC CGGTGTCGAT CCGCCTCAGC
GCTGACGTGG TGGCGCACTA CAAGGCGACC GGTCCCGGCT GGCAGTCGCG GATCGACGAG
ACGCTGCGCA AGGCAGCGAA GCTGAAGACC GGCTAG
 
Protein sequence
MSPRSKEPVF DDENPEWTEQ DFANARPPEE ILPPEILAQF KNTRGPQKAP TKVPVSIRLS 
ADVVAHYKAT GPGWQSRIDE TLRKAAKLKT G