| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3222 |
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| Symbol | |
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| ID | 6410892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3469668 |
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| End bp | 3470894 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642713098 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_001992199 |
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| Protein GI | 192291594 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.40917 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTCAG CCGGTCGTGC AGCCTCCTCA TCGCGGCTGC CGCCGGCGCT CAACATCATC
GCTCTATCGA GCTTCGCCGC GTCGCTGTCG ACCCGCGCGC TCGATCCGGT GCTGCCGCGG
ATCGCCGACG AGTTCTCGGT GACGATCACC ACCGCGGCGG GTCTCGCCGC GGTTACGGCC
TTCACCTTTG CGGTTGTGCA GCCGGCGATC GGTGCGCTCG GCGATCTGTT CGGCAAAGCG
CGGCTGATGA TCGTGTGTCT GGCGCTGCTC GGCTTCGCCA GCCTGCTCGG TGCGTTGTCG
TCGTCGTTCA CCGTGCTGTT CGTCTGCCGT ATCCTCGCCG GGATCGGCTC GGGCGGGGTG
TTTCCGGTGG CGCTGGGCCT TGCCAGCGAT CTCGTTACGG TCGATCGGCG GCAGGTCGCG
ATCGGCCGGG TGCTCGGCGG TTCGATGGCC GGCAATCTGC TCGGTGCTTC GGCGTCGGGA
GTGATCGGCG ACTTTCTTGG CTGGCGCGGC GTGCTGGCGA TCCTCGGCGT GCTGGTGATG
ATCGCCGCAA TCGCTGTGGC GTTCGGCGCG CGCGGCGCCA ATATGCCGCC ACGCAGCGCC
GAGATGGACC TGCCGGCGCT ACGCCGCGGC TATCGAACTA TCTTCAGCAA TCCCAACGCG
GCGATCTGCT TCACCGCGGT GCTGATCGAA GGCACCTGCG TGATGGGTGT GTTTCCTTAC
GTCGCGGCGT TTCTGCACGA GCAGGGCGAG CAGAGCCTCG CGATCGCGGG CCTGGTGATC
GCCGGCTTCG CGATCGGCGG GCTGATCTAC ACGCTGACGG TGTCGCAATT GCTGCCGCGG
CTCGGCACCA CCGGCATGAT GATCGGCGGC GGCCTGCTGG TGGCGCTGCA GCTCGCCGCG
ATCATGCTCG GCCCGCACTG GCAGGCGCAG ATGTTCGCCT TCGTCCTGAT GGGGATGGGG
TTCTACATGC TGCACGGCTG CATCCAGGTG TTCGCCTCCG AACTCACCGA GACCGCACGC
GGCACCGCGA TGTCGTTGCA CTCGTTCTTC TTCTTCATGG GCCAGACCAC CGGTCCGATC
GCCTACGGCT TCGGCCTGTC GCATCTCGGC AAGATCGCGA CGTTGACGCT GACGGCGCTG
ACGATGGCAA CGCTGGGGAT CGTGCTGGCG CGCATCCTCA AACCGCGGCC GCCGGCGGAT
GCGGTGGCTG GCGAATTGCC ACTCTAA
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| Protein sequence | MQSAGRAASS SRLPPALNII ALSSFAASLS TRALDPVLPR IADEFSVTIT TAAGLAAVTA
FTFAVVQPAI GALGDLFGKA RLMIVCLALL GFASLLGALS SSFTVLFVCR ILAGIGSGGV
FPVALGLASD LVTVDRRQVA IGRVLGGSMA GNLLGASASG VIGDFLGWRG VLAILGVLVM
IAAIAVAFGA RGANMPPRSA EMDLPALRRG YRTIFSNPNA AICFTAVLIE GTCVMGVFPY
VAAFLHEQGE QSLAIAGLVI AGFAIGGLIY TLTVSQLLPR LGTTGMMIGG GLLVALQLAA
IMLGPHWQAQ MFAFVLMGMG FYMLHGCIQV FASELTETAR GTAMSLHSFF FFMGQTTGPI
AYGFGLSHLG KIATLTLTAL TMATLGIVLA RILKPRPPAD AVAGELPL
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