| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3198 |
|---|
| Symbol | |
|---|
| ID | 6410868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 3445785 |
|---|
| End bp | 3446849 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642713075 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001992176 |
|---|
| Protein GI | 192291571 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGTCAC TACTGGCGGC TCTGCTGATC ATTTTCGTCG CGCTGTGCGG CGCGCCCGCG
TCCGCCGCAA GCTCGCCGCC GGAAGGGCTG CCCGAAGGCG TCGAACTGCC GGTCAAAGTC
CGCATCGGCC TGCGCGTGCT CGACATCACA GAAATCCGCG AAGTAATCGG CCGCGCGCGG
CTGTACGTCG AAGTCACCCA GCGCTGGACC GATCCGCGCC GGCGGTTCGA TCCGCTCGAC
GCCGGCACCT CGCGGATCGA CCGCGTCGGC GCCGACGCAC GGCAGTACAT CGCGGGCATC
TGGACGCCGG GCCTGGCGAT CGACAATCAG CTCGGCGAGC CGCGCGCCAA GGCCGACGCC
GTCTCGGTCT ATGCCGATGG AAGCGTCGTG CTGGTGGAGC GCTACGAGGC CGATTTCCGC
GTCGGCGTCG ACATGGCGGC GTTCCCGTTC GACCGCCAGC AGCTGTCGCT GTCGTTCTCG
CTGCCGCGCT ACGCCAAGCA GGACGCGATG CTGGTGACCA CCGAGACCGA CCGGTTGTTC
TCGCGGATCG AACCGAAACT GTCGGTGATC GACTGGCGGC CGCTCGACCT CACCTTCTTC
TACGACGAAG CCGCAGGCTG GAACGCGCGC GCCTATTCGC GGCTGAACGC GACGATCGGC
ATCGAGCGGC TGTCGGAGCG CTATCTGCTG CGGCTGTTCA TCCCGATCGT CTCGACCCTG
GCGGTGTCGC TGTTCGTGCT GTGGATCCCC GGCACCGCAC CGAAAGACCA CGGCAGCCTG
GTGTTCTCCG CCCTACTCGC GCTGGCGGCG ATCAGCTTCA CCTACGAGGC GAGTTTTCCC
GGCTCGATCT CGCTGAACAC GCCGATCGCG AAGATCATCT CGCTCGGCTA TTTCTATCTC
GTCGTGGTGG TGCTGATCGA CGCGCTGCTA TGGAAGCCGC GCAGCGATCC GGCCTCGCGC
TATCACGTCC TCGCCATCGG CCTTCGCTCT CACTGCCGCT GGGCGCTGCC GTCGATCATG
GTGATCGTCT GCCTCGCGCT GGTGCTACGG GGACTGCCGG GATAG
|
|---|
| Protein sequence | MRSLLAALLI IFVALCGAPA SAASSPPEGL PEGVELPVKV RIGLRVLDIT EIREVIGRAR
LYVEVTQRWT DPRRRFDPLD AGTSRIDRVG ADARQYIAGI WTPGLAIDNQ LGEPRAKADA
VSVYADGSVV LVERYEADFR VGVDMAAFPF DRQQLSLSFS LPRYAKQDAM LVTTETDRLF
SRIEPKLSVI DWRPLDLTFF YDEAAGWNAR AYSRLNATIG IERLSERYLL RLFIPIVSTL
AVSLFVLWIP GTAPKDHGSL VFSALLALAA ISFTYEASFP GSISLNTPIA KIISLGYFYL
VVVVLIDALL WKPRSDPASR YHVLAIGLRS HCRWALPSIM VIVCLALVLR GLPG
|
|---|
| |