Gene Rpal_3161 details

Gene Information

• Locus tag: Rpal_3161
• ID: 6410831
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 3407648
• End bp: 3408424
• Gene Length: 777 bp
• Protein Length: 258 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 642713039
• Product: Ion transport 2 domain protein
• Protein accession: YP_001992140
• Protein GI: 192291535

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.672229
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGCTGC ACGATGTCCG ACTCGCCGTT CGGCGGCTTT ACGACGGGGC GACGCCGCGC 
GGGGTGGCGT TTCGCTACGG CCTGCTGGCG TTCGACGTCG TCACCATCGT GTTCATCGTC 
GGCACGTCGT TTCTGCCGCC CAATCCAGTC GTCGAGGCGC TGGATACCGG GTTCGGCGTG 
CTGATCATGA TCGACTTCCT GGCGCGACTG TATGCCAGCC GCGGGCCGAT GCGGGAATTT 
GGGCGGCTCG CGACCTGGAC CGACCTGGTG GCGATCGGCT CGTTCCTGGC GCCGCTCCCC 
GGCGAGGGCG CCGGCTTCCT GCGGATCCTG CGCACGCTGC GCGCGTTCCA GGACTATCAG 
ATGCTGACCC GGCTGCGCAG CGACAGCGCT TTCTTCCGCC ACCACGAAGA GGTGGTGATC 
GCGGTGGCGC GACTGGCGGT GTTCATCTTC GTGATGACGG CGATCGTGTT CGAGACCCAG 
CGGTTCAGCA ATCCGCAGAT CGCCAACTAC GCGGACGCGC TGTACTTCAC CGTCACCGCG 
CTGACCACCA CCGGGTTCGG CGACATCACC CTGCCCGGCA CGCTGGGGCG GATGATCAGC 
GTGGTGATCA TGATCTTCGG CGTGACGCTG TTCTTCAATC TGGCGCGGGC GCTGATCAGT 
CCGAACAAGG TGCGCTTTCC CTGCCCGACC TGCGGCCTGC AGCGCCACGA CATCGATGCG 
GTGCATTGCA AGGCGTGCGG CACCGTGCTG AATATTCCGG ACGAGGGCCG CGACTGA 

 

Protein sequence

MTLHDVRLAV RRLYDGATPR GVAFRYGLLA FDVVTIVFIV GTSFLPPNPV VEALDTGFGV 
LIMIDFLARL YASRGPMREF GRLATWTDLV AIGSFLAPLP GEGAGFLRIL RTLRAFQDYQ 
MLTRLRSDSA FFRHHEEVVI AVARLAVFIF VMTAIVFETQ RFSNPQIANY ADALYFTVTA 
LTTTGFGDIT LPGTLGRMIS VVIMIFGVTL FFNLARALIS PNKVRFPCPT CGLQRHDIDA 
VHCKACGTVL NIPDEGRD