Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3129 |
Symbol | |
ID | 6410800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 3377289 |
End bp | 3377630 |
Gene Length | 342 bp |
Protein Length | 113 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642713009 |
Product | putative monovalent cation/H+ antiporter subunit C |
Protein accession | YP_001992110 |
Protein GI | 192291505 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1006] Multisubunit Na+/H+ antiporter, MnhC subunit |
TIGRFAM ID | [TIGR00941] Multicomponent Na+:H+ antiporter, MnhC subunit |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAACTGA TCGTCTCACT CGCCATCGCC GTGCTGACCG GCTCCGGGGT CTGGCTGCTG CTGCGGCCGC GCACCTTCCA GGTGATCATC GGCCTGGCGC TGCTGTCCTA TGCGGTGAAC CTGTTCATCT TCAGCATGGG CCGGCTCAAA GTCGGGGCCG CGGCGGTGCT GGAGAAGGGG CAGATCGCCG ATCCCCACGC CTTCGCCGAT CCGCTGCCGC AGGCGCTAGT GCTCACCGCC ATCGTGATCA GCTTCGCCAC CACGGCGCTG TTCCTGGTGG TGCTGCTGGC ATCGCGCGGC CTTACCGGAA ATGACCACGT CGACGGCCGG GACCACGAAT GA
|
Protein sequence | MELIVSLAIA VLTGSGVWLL LRPRTFQVII GLALLSYAVN LFIFSMGRLK VGAAAVLEKG QIADPHAFAD PLPQALVLTA IVISFATTAL FLVVLLASRG LTGNDHVDGR DHE
|
| |