Gene Rpal_3129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3129 
Symbol 
ID6410800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp3377289 
End bp3377630 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content66% 
IMG OID642713009 
Productputative monovalent cation/H+ antiporter subunit C 
Protein accessionYP_001992110 
Protein GI192291505 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1006] Multisubunit Na+/H+ antiporter, MnhC subunit 
TIGRFAM ID[TIGR00941] Multicomponent Na+:H+ antiporter, MnhC subunit 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTGA TCGTCTCACT CGCCATCGCC GTGCTGACCG GCTCCGGGGT CTGGCTGCTG 
CTGCGGCCGC GCACCTTCCA GGTGATCATC GGCCTGGCGC TGCTGTCCTA TGCGGTGAAC
CTGTTCATCT TCAGCATGGG CCGGCTCAAA GTCGGGGCCG CGGCGGTGCT GGAGAAGGGG
CAGATCGCCG ATCCCCACGC CTTCGCCGAT CCGCTGCCGC AGGCGCTAGT GCTCACCGCC
ATCGTGATCA GCTTCGCCAC CACGGCGCTG TTCCTGGTGG TGCTGCTGGC ATCGCGCGGC
CTTACCGGAA ATGACCACGT CGACGGCCGG GACCACGAAT GA
 
Protein sequence
MELIVSLAIA VLTGSGVWLL LRPRTFQVII GLALLSYAVN LFIFSMGRLK VGAAAVLEKG 
QIADPHAFAD PLPQALVLTA IVISFATTAL FLVVLLASRG LTGNDHVDGR DHE