| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3113 |
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| Symbol | |
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| ID | 6410784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3356526 |
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| End bp | 3357767 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642712993 |
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| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
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| Protein accession | YP_001992094 |
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| Protein GI | 192291489 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0987937 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGTCC TGACTTCGCT GCTTTCTCCG CGCTCGTCCC TATGGCGCGG CCTGTTGGCG
GGCCTGATCG CCGTCGCGGT CGGGGCAGGG CCGGTGACCG CCGCCAATCA AAGCGTGCAG
GGCGCCAAGA AGGACGATTC CGGTTTCGAG GCCCAGGCGC CGAGCGCGAT CCTGGTCGAT
GCCGAGAGCG GCAGCGTGCT GTTCGAGAAG AACGCCGACG AACTGCGCGC GCCGTCGAGC
ATGATGAAGC TGATGACGGT CGAGACGGTG TTTCATCTGC TCAAGACCGG CGATTTGCAG
CTCACCCAGG AATACCGGGT GAGCGAGAAC GCGTGGCGCA ACGGCGGCGC GCCGGCCGGC
GGCTCGACCA TGTTCGCCGA GATCCACAGC ATCATCTCTG TCGACAATCT GCTGCATGGC
GCGATCATCC AGAGCGGCAA CGACTCCTGC ATGGTGCTGG CAGAGGGGAT CGCCGGCAGC
GAGGCGGCGT TCGTCGAGCA GATGACCAAG CGGGCCCGCG CGATCGGGCT GACGCAGTCG
ACCTTCGCCA ATTCCACCGG GCTACCGAAC CCCGACAACA AGATGAGCGT GCGCGAACTG
GCCAAGCTCG CCCGGCACAT CATCCTGACC TACCCCGAAT ACTACCCGCT GTTCGGCGAG
AAGGAATTCA CCTGGAACAA GATCCGCCAG ACCAATCGCA ATCCGCTGCT GAATGCGATG
CCGGGCGCCG ATGGTTTCAA GACCGGCTAC ACCAAGGAGG GCGGCTACGG CATGGTCGGC
TCGGCGGTGC AGAACGGGAT GCGGCTGATC GTAGTGGTGA ACGGTCTCGA TGACGCCGAC
GACCGCGCCA GCGAAGCCAA GAAGTTGCTG GAATGGGGCT TCCGCAATTT CGAGTCGCGG
TCGCTGTTCG CCAATGATGC CACGATCGGT TACGCCCGGG TGTTCGGCGG TGAGAAGCGC
TACGTGCCGC TGACGCCGGC CGAGCCGGTT CGGGTGATGG TACGCAAGAA CGGCAGCGAC
AAGCTGATCG CGCGGATCGT GTATCAGGGG CCGGTGCCGG CGCCGGTCGA ATCGGGCCAG
CGGGTCGGGA TGGTCCGGGT GTGGCGAGGC CCCAACCTCG CGGTCGAGGT GCCGCTGAAG
GCGGCCGAGG CCGATCCGGT CGGCTCGACG ATGCGGCGCG CGCTTGACGG AGCCAGCGAG
CTGACGATCG GCCTGGTGCG GGCCGGCATG GCAAAGCTCT GA
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| Protein sequence | MSVLTSLLSP RSSLWRGLLA GLIAVAVGAG PVTAANQSVQ GAKKDDSGFE AQAPSAILVD
AESGSVLFEK NADELRAPSS MMKLMTVETV FHLLKTGDLQ LTQEYRVSEN AWRNGGAPAG
GSTMFAEIHS IISVDNLLHG AIIQSGNDSC MVLAEGIAGS EAAFVEQMTK RARAIGLTQS
TFANSTGLPN PDNKMSVREL AKLARHIILT YPEYYPLFGE KEFTWNKIRQ TNRNPLLNAM
PGADGFKTGY TKEGGYGMVG SAVQNGMRLI VVVNGLDDAD DRASEAKKLL EWGFRNFESR
SLFANDATIG YARVFGGEKR YVPLTPAEPV RVMVRKNGSD KLIARIVYQG PVPAPVESGQ
RVGMVRVWRG PNLAVEVPLK AAEADPVGST MRRALDGASE LTIGLVRAGM AKL
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