Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3105 |
Symbol | |
ID | 6410776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 3349638 |
End bp | 3350066 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642712985 |
Product | thioesterase superfamily protein |
Protein accession | YP_001992086 |
Protein GI | 192291481 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.886313 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACATG CGAGGATGGG CGTAGGCGAA CTCGAAGAAT TTCTGCAGCG CGAGTTCCCG CAGGCGTTCA GCCACGGTGA CATTTCGATC GAGACCGCCG ATGGTCGCAC ATCTTTATTG CGGCAGCGCT ACAGCGACCG GATGCTGCGC CCGGGCGGCA CCGTTTCGGG CCCGACCCTG ATGGCGCTGG CGGATTTCGC CATGTACGTC GTGCTGCTGT CGGCGATCGG ACCGGTCGCG CTCGCCGTCA CCACCAATCT CAACATCAAC TTCTTGCGGA AGGGCCAGCC CGGCCAGGAC GTGGTCGCGG TCGCCAAGCT TTTGAAGCTC GGCCGGCGGC TGGCGGTCGG GGAGGTGACG CTGCTGTCCG GCACCTCGCC GGATCCGATC GCTCACGTGA CGTCGACCTA TTCCATTCCA GTCGCTTGA
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Protein sequence | MTHARMGVGE LEEFLQREFP QAFSHGDISI ETADGRTSLL RQRYSDRMLR PGGTVSGPTL MALADFAMYV VLLSAIGPVA LAVTTNLNIN FLRKGQPGQD VVAVAKLLKL GRRLAVGEVT LLSGTSPDPI AHVTSTYSIP VA
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