Gene Rpal_3071 details

Gene Information

• Locus tag: Rpal_3071
• ID: 6410742
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 3316623
• End bp: 3318791
• Gene Length: 2169 bp
• Protein Length: 722 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 642712951
• Product: hypothetical protein
• Protein accession: YP_001992052
• Protein GI: 192291447

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.0928136
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAATT GGTGGGACGC GGCGCCGCTC GCCGCTGATA TCAAGTCGGC TTCTCCGCCT 
GCTACCTCGC CGGGAGCGGG CGCGAATTGG TGGGATGCCG CGCCGATTGC GAATGAGGCG 
GCCGCGCCGA ACCCGCAAAT GGTCAAGGGT GCAGACGGCG CGCCGACCCG TGTCATCATG 
GACATGAGCA AGAAGCCTGA TCGTGGCGTC GTCGATGCGG CGGCCCGCGG AGTGGCGCAG 
GGGTTGACGG TCAATTTCAA CGACGAGCTA CGCGGGCTTG TCGAGGCCGG AGGAGCTGAC 
CCGAACGACC CCGCAAGCCT TGGGAAACTG CTCACCGGAG CGCTGCAGTA CTGGACCGGA 
GATGCCGAGG CCAAAAAGCG GTACGACGAC GCTGTGGCAC GCGAGCGGAC GGCGACCAAA 
CTTGCCGAGG AACAGCACCC GGTCGCGTCG ATCGCCGGCA ACATGGCTGG AGCCCTTGCG 
CTTCCCATAG GAGCCGCGGG AGGTGCGGTA ACTCTACCTG GTCGTATGAC CCGTGGCGCA 
ACCGTTGGCA GCGTCCTCGG GACTGCTGCG GGCGCCGGCG ATGGCGAAGG CGCATCGGAT 
ACGATCGGCA AGGCGATGAT GGGTGCCGGT GTTGGCGGCG TGGTCGGCGG CGCCGCCCCG 
GCGCTGCTGC GCGGCGCCGA GCTGGCCGGT GCAGGCATTG CCAAAGCTGC CGAGCCCGTC 
AAGAATTCGA TCAGAGGCTA CCGCGATCCG GAGGCCGAGG CGGCTAGACG GGTGATGTCT 
GCGCTTGAGC GCGACACCGC GAACAATGGT GCCGGCCTTG ACGAAATGAT GCTGAGGTAT 
TCCAACGCCA ATGGAATGCC TGCGGCAATC ATGGACATGG GCGGAGAAGC CACACGCGCG 
CTCGCCAGAT CTGCCGCGAA CACCTCGCCG GAGGCCCGAG GTGTCCTCAA CCGGACGATC 
AACGACCGCT TCGAGGGGCA GGGCCCGCGG TTCACAGACT GGCTTAACCG GACGTTCCAC 
TATCCGAACG CGCAGGCGCA GCAAGAGGCA ATCAACGCCG TCGAGCGAAC GGTGAACCGG 
CAGGGATATG CCGCGGCATA CCGTGCCGGC GATCGGGACA TTCTGACGCC AGAGCTTGAA 
CGGCTGCTTG GAAGCCCGGC AGTTGGTCAG GCAATGGCAA AGGCTGTCGA GAGTGGAAAG 
AACCGAGCTG TTGTGCAGGG TTTCGGCGGG TTCAATCCGC GTGTGACTGT CGAAAACGGG 
ATGGTCAAAT TCAATCGCGG GCCTACCGGC GTCCCGGCTT CGCCGAACCT GCAGTTGTGG 
GACTACACCT ATCGCGAGCT TCGGGACGCT GGGCAGGCGG CCTACCGCGC AGGCCGAAAT 
GAGGAGGGGG CTTCGCTTTC AGCGCTCGCG CGGACGATGC GAGAAGAGCT GGATGCTGCC 
GTGCCGGAAT TTGCCAAGGC CCGCGGCGTC GCGGCATCGT TCTTCAAAGC TGAAAATGCG 
CTTGAAGCGG GGCAGAAGTT CGTCGCCGAG AACTTCAACA ACCGCCAAGC CCGCGCGGCG 
CTGACGCGGA TGTCTCCGAA CGAACGGCAG TTGTTTCAAG ACGGGTTCGT GTCGCGCTTC 
ATTGAGACGC TCGACCGTGT CGGAGATCGC CGCAGCGTCC TCAACCAGAT CGCGCAGTCT 
CCGGCGGCAC GCGAAAAGCT GACCATCGCC CTTGGACCAC GAAAGGCTGC TGAGTTAGAA 
ACTAGACTGC GGGTCGAAGG GATCATGGAT CTCGCCCGCG CCGCGGTGCA GGGCAACTCG 
ACCACAGCGC GGCAGTTGAT CGAATCAGGC CTTGCCGGCG GCGTCGGATA TGGCGTCACA 
ACAGGCGATT GGAGCCCGCA GAATTTGTTC ACCGCGGCAT TCGTTGGCGG GGTGGCTCGC 
GGTGCGGCGT CGCGAGCAAA CCAGCGTATT GACGTGAATG TATCACGTCA GGTTGCGGAT 
TTGCTGACCT CTAGCGACCC GAAACGATTG CTGGCAGGAG TTCAAATCGT GGCGAGGAAT 
AGCAAAATGC TCGATGCGCT TCGCGCTGCT GATCTCAGGC TTGCGCGCGT CGGCGGGCAG 
CAGGCCACTG TCGTTCCGCT TGTTTCGGCC GTGCTGCCAA CGCGCAGCGA AGAAAACAAG 
CCAAAATGA 

 

Protein sequence

MANWWDAAPL AADIKSASPP ATSPGAGANW WDAAPIANEA AAPNPQMVKG ADGAPTRVIM 
DMSKKPDRGV VDAAARGVAQ GLTVNFNDEL RGLVEAGGAD PNDPASLGKL LTGALQYWTG 
DAEAKKRYDD AVARERTATK LAEEQHPVAS IAGNMAGALA LPIGAAGGAV TLPGRMTRGA 
TVGSVLGTAA GAGDGEGASD TIGKAMMGAG VGGVVGGAAP ALLRGAELAG AGIAKAAEPV 
KNSIRGYRDP EAEAARRVMS ALERDTANNG AGLDEMMLRY SNANGMPAAI MDMGGEATRA 
LARSAANTSP EARGVLNRTI NDRFEGQGPR FTDWLNRTFH YPNAQAQQEA INAVERTVNR 
QGYAAAYRAG DRDILTPELE RLLGSPAVGQ AMAKAVESGK NRAVVQGFGG FNPRVTVENG 
MVKFNRGPTG VPASPNLQLW DYTYRELRDA GQAAYRAGRN EEGASLSALA RTMREELDAA 
VPEFAKARGV AASFFKAENA LEAGQKFVAE NFNNRQARAA LTRMSPNERQ LFQDGFVSRF 
IETLDRVGDR RSVLNQIAQS PAAREKLTIA LGPRKAAELE TRLRVEGIMD LARAAVQGNS 
TTARQLIESG LAGGVGYGVT TGDWSPQNLF TAAFVGGVAR GAASRANQRI DVNVSRQVAD 
LLTSSDPKRL LAGVQIVARN SKMLDALRAA DLRLARVGGQ QATVVPLVSA VLPTRSEENK 
PK