Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3034 |
Symbol | |
ID | 6410705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 3292743 |
End bp | 3293534 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642712914 |
Product | ERF family protein |
Protein accession | YP_001992015 |
Protein GI | 192291410 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACGCCC AAGCCGAGAC CATCAGGCCG TTGCGCGCCA TGACCCGCCG CGGCGCACCG CAGGCGCAGA CCGCGCCCGC CGTCCACTCA CCTATGGACA TCGTTGCGGC CGCACTCTCG ACCGGAAACG TCGAGATGTA CCGCGAAGCT GTGGCGTTGA TGAAGGAGAT GGAGGCATTC GCCGCCCGCA AAGCGTTCAG CAATGCTCTT GCTGACGCGA AAGTCGATCT CCCGATCATC GAAAAGAACA GGCACGCCAG CTACGACAAT AAGGCCGGAA GGCAGACCAA TTATTGGCAT GAAGATTTGG CCCAGGTTGT TGATACCGTT GTTCCGATCC TCGCGAAGCA CGGTCTTTCA CACCGCTGGA AACTCGCCGG CAGACCGGGC GAGCCGGTGA CCGTTACTTG CGTCATCTCG CACCGTGACG GTCATTGTGA GGAGAACAGC CTATCGGCCG ACGCTGACAC GTCCGACGGC AAGACCCCCA TTCAAGGGGT CAAATCTACT ACCTCGTACT TGGAGCGGAT CACGCTCATG GCGTCGCTTG GCCTCGCGTC GCGCAAGGAC GATGACGACG GCCGCGGCGG AGCCCAGGCA GAGCCGGCAT ACGTCCCGCC GGCCGGCTCA ATCACTCCCG ATCAAGCCGA TTTCCTGCGC AGCGAGATAA AGGCGAAGGG CGCCAGCGAA ATCGCGTTTC TCGCCGCCGT CAAGCGGAGG CGGATCGAGG ACATTCCGGC GACGGACTAC GCCGCCGCCG CCATGATCAT TGCAAAATTC AAGAAGGGCT GA
|
Protein sequence | MNAQAETIRP LRAMTRRGAP QAQTAPAVHS PMDIVAAALS TGNVEMYREA VALMKEMEAF AARKAFSNAL ADAKVDLPII EKNRHASYDN KAGRQTNYWH EDLAQVVDTV VPILAKHGLS HRWKLAGRPG EPVTVTCVIS HRDGHCEENS LSADADTSDG KTPIQGVKST TSYLERITLM ASLGLASRKD DDDGRGGAQA EPAYVPPAGS ITPDQADFLR SEIKAKGASE IAFLAAVKRR RIEDIPATDY AAAAMIIAKF KKG
|
| |