Gene Rpal_2988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2988 
Symbol 
ID6410658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp3258666 
End bp3259718 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content67% 
IMG OID642712869 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionYP_001991971 
Protein GI192291366 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATCA AATTCGGCCG TCCCATCGAG ATTCGTGACC CCTCGACCCG GCCCGCCGCT 
CCGCCGCTCG ATCTCACCAT CCGTCCGCGC CGCAACCGCA AGACCGAGTG GGCTCGCCGT
CTGGTGCGCG AGAATGTCCT CACCACCGAC GACCTGATCT GGCCGATGTT CGTGGTCGAC
GGCACCAACC AGCGGGTTCA GGTCGCCTCG ATGCCGGGCG TCGAACGACT CAGCGTCGAC
CAGATCGTTC GCGACGCCGA ACGCGCCGCC AAGCTCGACA TCCCGTGCAT CGCGCTGTTC
CCATTCACCG AGCCGTCGCT GCGCGACGAG CACGGCACCG AAGCCGCCAA CCCGGAAAAC
CTGATCTGCA AGACCGTCCG CGCGATCAAG AAGGAATTCC CGCAGATCGG CGTGCTGTGC
GACGTCGCGC TCGACCCCTA CACCAGCCAC GGCCATGACG GCCTGATCGA GGACGGCCGC
ATCCTCAACG ACGAGACCGT CGCGGTGCTG GTGCAGCAGT CGCTGGTGCA GGCGCAGGCC
GGCTGCGACG TGATCGCACC GTCGGACATG ATGGATGGCC GCATCGGCGC GATCCGCGAA
GCGCTCGATG CCGCCGGCTA CCTCGACGTT CAGATCATGG CCTATGCGGC CAAGTATGCG
TCCGCCTTCT ACGGCCCGTT CCGCGACGCG ATCGGCTCGG CCAAGGCGCT CACCGGCGAC
AAGCGCACCT ACCAGATGGA TCCGGCCAAC ACCGACGAGG CGATCCGCGA GGTCGAGCTC
GATCTCGCCG AGGGCGCCGA CATGGTCATG GTCAAGCCGG GCATGCCGTA TCTCGACATC
GTCCGCCGCG TGAAGGAGAC CTTCGGCGTG CCGACCTTCG CCTATCAGGT GTCGGGCGAG
TACGCGATGA TCGCCGCGGC AGCCAACAAT GGCTGGCTGG ACGGCGACCG GGCGATGATG
GAGAGCCTGC TCGCCTTCAA GCGCGCCGGC GCCAACGGCG TGCTGACCTA CTTCGCCCCG
GCGGCGGCCG AAAAGCTGCG GCAGCAGGGC TAA
 
Protein sequence
MAIKFGRPIE IRDPSTRPAA PPLDLTIRPR RNRKTEWARR LVRENVLTTD DLIWPMFVVD 
GTNQRVQVAS MPGVERLSVD QIVRDAERAA KLDIPCIALF PFTEPSLRDE HGTEAANPEN
LICKTVRAIK KEFPQIGVLC DVALDPYTSH GHDGLIEDGR ILNDETVAVL VQQSLVQAQA
GCDVIAPSDM MDGRIGAIRE ALDAAGYLDV QIMAYAAKYA SAFYGPFRDA IGSAKALTGD
KRTYQMDPAN TDEAIREVEL DLAEGADMVM VKPGMPYLDI VRRVKETFGV PTFAYQVSGE
YAMIAAAANN GWLDGDRAMM ESLLAFKRAG ANGVLTYFAP AAAEKLRQQG