Gene Rpal_2965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2965 
Symbol 
ID6410635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp3235839 
End bp3236513 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content69% 
IMG OID642712846 
ProductUracil-DNA glycosylase superfamily 
Protein accessionYP_001991948 
Protein GI192291343 
COG category[L] Replication, recombination and repair 
COG ID[COG1573] Uracil-DNA glycosylase 
TIGRFAM ID[TIGR00758] uracil-DNA glycosylase, family 4 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGACGT TGACGCGGGG CTCCGGGCCC CGCGTCCCGA CCTCCCTTAC CGACCCTGAC 
CGCGACTGCC CGTTGTGCCC ACGACTCGCT GAATTCCGCA GCGAGGCCCG CGCGCGCGAA 
CCGGGCTGGT TCAACGCGCC CGTCCCGTCG TTCGGCGGCG CCGACGCCTC GCTGCTGATT 
GTCGGCCTTG CGCCGGGCCT ACAGGGCGCC AACCGCACCG GCCGGCCGTT CACCGGCGAC 
TACGCCGGCG ACCTGCTCTA CGCCACGCTG ATCGACTACG GCTTCGCCCG AGGTCACTAT 
CAGGCCCGGC CCGACGATGG GCTGCAGCTG ACCGACTGCC GGATCAGCAA CGCGGTGCGT 
TGCGTGCCGC CGCAGAACAA GCCGCTGCCG ATCGAAATCA ACACCTGCCG CCGCTTTCTG 
ATCGCCACGA TCGAAGCGAT GCCGAAGCTG CGTGCGATCG TCCTGCTCGG GCGGATCGCT 
CACGATTCAA CGCTGAAGGC GCTCGGCCTC CGTGCCGCCC AGGCCCCGTT CGGCCATGGC 
GCCGTGCACG ATGCCGGCCG ACTGCGCCTC TACGACAGCT ACCACTGCTC GCGCTACAAC 
ACGAACACCG GCGTGCTGAC GCCGAAGATG TTCCGCGATG TGTTCGCGCG GGTGCGGACT 
GACCTCGATA CTTAA
 
Protein sequence
MPTLTRGSGP RVPTSLTDPD RDCPLCPRLA EFRSEARARE PGWFNAPVPS FGGADASLLI 
VGLAPGLQGA NRTGRPFTGD YAGDLLYATL IDYGFARGHY QARPDDGLQL TDCRISNAVR 
CVPPQNKPLP IEINTCRRFL IATIEAMPKL RAIVLLGRIA HDSTLKALGL RAAQAPFGHG 
AVHDAGRLRL YDSYHCSRYN TNTGVLTPKM FRDVFARVRT DLDT