| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2964 |
|---|
| Symbol | |
|---|
| ID | 6410634 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 3235148 |
|---|
| End bp | 3235726 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642712845 |
|---|
| Product | Redoxin domain protein |
|---|
| Protein accession | YP_001991947 |
|---|
| Protein GI | 192291342 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1225] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGAAAC AGCCCGATCT TCTCAAGGTC GATTGGAGCG CGATTCCTGC GCCTGACGAT
GATGGCGCCG CCGCTCATCT GCCGGGCGCC ACGATCCAGC CGGTCGCGCT GCCGGCGACC
GATGGAGGGG CAGTGACGCT GTCGTCGCTG CCCGGGCGGA CCGTGCTGTT CATCTATCCG
CGGACGGGCG TGCCCGGTCA GATCAGTCTG GTCGACGACT GGGACATGAT CCCCGGCGCA
CGCGGCTGCA CGCCGCAGAC CTGTTCGTTC CGCGATCTGT TCGCTGATCT GAAAACCGCA
GGCGCGGATG CGGTGTTCGG TCTGTCGACG CAGTCGAGCG CCTATCAATC CGAGATGGCG
ACCCGGCTGC ATCTGCCGTT CCCGGTGCTG TCCGACGAGA GCCTCGAACT GACGCGCGCA
CTCAACCTGC CGACGATGCA GGTCGCCGGC ATGACGCTGC TCAAGCGGAT GGCGCTGATC
ATCGACGACG GCCGCATCAG CCACGTGTTC TATCCGGTCT TCCCGCCGGA TCGGAACGCC
GGCGACGTGC TGGAATGGCT CAAGGCCAAT CCGCGCTGA
|
|---|
| Protein sequence | MTKQPDLLKV DWSAIPAPDD DGAAAHLPGA TIQPVALPAT DGGAVTLSSL PGRTVLFIYP
RTGVPGQISL VDDWDMIPGA RGCTPQTCSF RDLFADLKTA GADAVFGLST QSSAYQSEMA
TRLHLPFPVL SDESLELTRA LNLPTMQVAG MTLLKRMALI IDDGRISHVF YPVFPPDRNA
GDVLEWLKAN PR
|
|---|
| |