| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2899 |
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| Symbol | |
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| ID | 6410568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3163646 |
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| End bp | 3164668 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642712779 |
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| Product | extracellular solute-binding protein family 3 |
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| Protein accession | YP_001991882 |
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| Protein GI | 192291277 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.507436 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTTTGC ATCTGCGATG GACGACGTCG ATCGGCGCAG CCCTCGCAGT CGTCCTTGCT
CTGGTGTCGA GCGCCGCATC GGCCGGGCCG ACGCTCGATC GCATCAAATC CCGCGGCGTG
ATCAAGGTCG GCGTCGGAAC CACGCCCGGC TATTTCGCGC CGGATTCGAA CGGCCGGTGG
CAAGGCTTCT TCGTCGACTT TGGACGAGCT CTGGCTGTGA CCGTGTTCGG AGATCCCGAC
AAGGTGCAGT TCACCAGTTC GTCGCCGCAG CAACGGCTGC CGGCGCTGCA GTCGGGCGAG
TTCGACGTGC TGCTGTCGGG CGTCACCGTC ACCATCACCC GTGCATTCAA GCTCGGCTTT
CATTTCGGTC CGACCATCTT CTACGACGGC CAGGGCATCC TGGTGCGCAA GGATCTCGGA
GTGACTTCCG CGTCGCAGCT CGACGGCGCG ACGATCGGCA TCCAGAGCGG CACCACCGGC
GAACTGAACA TCGCCGACTA TTTCCGCAAG CACCGGCACA AATTCACGCC GGTGACGATC
GAGGACACCA GCGAATTCAT CGCGGCCCTC GACTCCGGTC GCGTCGACGG GCTGACCCAG
GACGCTTCCG ACCTCGCGGC CAAGCAGACC CAGCTGAAGA AGCCGGGCGA CTACGTGATT
TTGCCGGAGC GGTTGTCGAA GGAGCCGCTG GCACCGGCGG TTGCGGGCGG CGACGATCGC
TGGCTCGAGA TCGTCACCTG GACGGTCAAC GCCACGATCC AGGCCGAGGA GTGGGGGATC
ACGTCGAAGA ACGTCGACGA CTTCCTCAAA TCCGACGATC CGTCGATCCG GCGGTTCCTC
GGCGTCGATC CGTCGCTCGC CGAGTCGATC GGGCTCGATC CGAAATGGGC CTACACGATC
ATCAAGACGG TCGGCAATTA CGGCGAGATC TTCGATCGGC ACCTCAAACC GCTCGGCTGG
GAGCGCGGCT ACAATCGGCT GTGGACCCAG GGCGGATTGT TGTACTCGCC GCCGTTCCGC
TGA
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| Protein sequence | MVLHLRWTTS IGAALAVVLA LVSSAASAGP TLDRIKSRGV IKVGVGTTPG YFAPDSNGRW
QGFFVDFGRA LAVTVFGDPD KVQFTSSSPQ QRLPALQSGE FDVLLSGVTV TITRAFKLGF
HFGPTIFYDG QGILVRKDLG VTSASQLDGA TIGIQSGTTG ELNIADYFRK HRHKFTPVTI
EDTSEFIAAL DSGRVDGLTQ DASDLAAKQT QLKKPGDYVI LPERLSKEPL APAVAGGDDR
WLEIVTWTVN ATIQAEEWGI TSKNVDDFLK SDDPSIRRFL GVDPSLAESI GLDPKWAYTI
IKTVGNYGEI FDRHLKPLGW ERGYNRLWTQ GGLLYSPPFR
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