| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2863 |
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| Symbol | |
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| ID | 6410532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3122667 |
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| End bp | 3124109 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642712743 |
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| Product | nitrogen metabolism transcriptional regulator, NtrC, Fis Family |
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| Protein accession | YP_001991846 |
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| Protein GI | 192291241 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGCAG GTAGTATTCT CGTCGCGGAC GACGACACCG CCATCCGCAC GGTGCTCAAC
CAAGCGCTGT CGCGCGCCGG CTACGAAGTG CGGTTGACCG GCAACGCGGC GACGCTGTGG
CGTTGGGTGA GCCAGGGCGA GGGCGATCTG GTGATCACCG ACGTGGTGAT GCCGGATGAG
AACGCGTTCG ATCTGCTGCC GCGGATCAAG AAGCTGCGCC CGAACCTGCC GGTCATCGTG
ATGAGCGCGC AGAACACCTT CATGACGGCG ATCCGCGCCT CGGAGAAGGG CGCCTACGAA
TATCTGCCGA AGCCGTTCGA CCTGAAGGAG CTGATCGCGA TCGTCGGCCG CGCGCTGGCC
GAGCCGAAGG AACGCATCTC CAGCGCCAAC GACGAGGGCG AGTTCGATTC GATTCCGCTG
GTCGGGCGCT CACCTGCGAT GCAGGAAATC TATCGGGTGC TGGCGCGGCT GATGCAGACC
GACCTCACGG TGATGATCAC CGGCGAGTCC GGTACCGGCA AGGAACTGGT GTCGCGGGCG
CTGCACGACT ACGGCAAGCG CCGCAACGGT CCGTTCGTCG CCGTCAATAT GGCGGCGATC
CCGCGCGACC TGATCGAATC CGAATTGTTC GGCCATGAGC GCGGCGCCTT CACCGGCGCC
AACACGCGAG CCTCCGGCCG ATTCGAGCAG GCCGAGGGCG GCACGCTGTT TCTCGACGAA
ATCGGCGACA TGCCGATGGA GGCGCAGACC CGGCTGCTGC GCGTGCTGCA GCAGGGCGAG
TACACCACGG TCGGCGGGCG CACCCCGATC AAGACCGACG TCCGGATCGT CGCGGCCTCC
AACAAGGATC TGCGGGTCCT GATCCAGCAG GGCCTGTTCC GCGAAGACCT GTTCTTCCGC
CTCAACGTGG TGCCGCTGCG GCTACCGCCG CTGCGCGAGC ACATCGAGGA CCTGCCGGAT
CTGGTTCGGC ACTTTTTTGC GCTGGCCGAG AAGGACGGCC TGCCGGCCAA GAAGCTCGAC
GCCGCCGCAT TGGAGCGGAT GAAGCAGCAT CGCTGGCCGG GCAACGTTCG CGAGCTGGAA
AATCTCGCCC GCCGCCTGGC GGCGCTGTAC CCGCAGGAGG TGATCACCGC CTCGGTGATC
GATGGCGAGC TGGCGCCGCC GCCGGTGGTG GCTGGCGGCA GCGCACCGCA CACCGTCGAC
AATCTCGGCG GCGCAGTCGA GATGTATCTG TCATCGCACT TCTCGGGCTT TCCGAACGGT
GTGCCGCCGC CCGGCCTCTA CCACCGGGTG TTGCGCGAGA TTGAAGTGCC ATTGCTCACG
GCAGCGCTGG CGGCGACTCG CGGCAACCAG ATCCGGGCCG CCGACCTGCT CGGGCTCAAC
CGCAACACTT TGCGGAAGAA GATCCGCGAC CTCGACATTC AGGTCTACCG CACCGGCGGC
TGA
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| Protein sequence | MPAGSILVAD DDTAIRTVLN QALSRAGYEV RLTGNAATLW RWVSQGEGDL VITDVVMPDE
NAFDLLPRIK KLRPNLPVIV MSAQNTFMTA IRASEKGAYE YLPKPFDLKE LIAIVGRALA
EPKERISSAN DEGEFDSIPL VGRSPAMQEI YRVLARLMQT DLTVMITGES GTGKELVSRA
LHDYGKRRNG PFVAVNMAAI PRDLIESELF GHERGAFTGA NTRASGRFEQ AEGGTLFLDE
IGDMPMEAQT RLLRVLQQGE YTTVGGRTPI KTDVRIVAAS NKDLRVLIQQ GLFREDLFFR
LNVVPLRLPP LREHIEDLPD LVRHFFALAE KDGLPAKKLD AAALERMKQH RWPGNVRELE
NLARRLAALY PQEVITASVI DGELAPPPVV AGGSAPHTVD NLGGAVEMYL SSHFSGFPNG
VPPPGLYHRV LREIEVPLLT AALAATRGNQ IRAADLLGLN RNTLRKKIRD LDIQVYRTGG
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