Gene Rpal_2852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2852 
Symbol 
ID6410521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp3110697 
End bp3111473 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content71% 
IMG OID642712732 
Producthypothetical protein 
Protein accessionYP_001991835 
Protein GI192291230 
COG category[S] Function unknown 
COG ID[COG3827] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCAGC CTGCAAAGGC GCAAGAACCT TCCATGGAGG AGATTCTGGC GTCGATCCGT 
CGCATCATTG CCGATGACGA AGCCAAGCCC GCGACCCCGG CACCTGCGCC GGCGGCCGTT
GCCCCGAAGC CGGAGCCGCC CAAGCCGGCT CCCCCGCCGA GCAAGCCCGC GGCCATGACC
CCACCTCCGT CTGCACCGAG TCCGGTGGCG CAAGCTGCGC CGCCCAAGCC CGCCGCCGCA
CCGAAGCCGG CGCCTCCGCC GATGCCGGCT CCGGCCGAGA GCAACAGTCA GGACGACATC
GACGCACTGC TGGCCGGCCT CGACGCCGGC ACCACCGAGG AGGAAGTTCG TCCGCCGCAG
CCGGACGGCG ACGTCCTTGA GCTGACCGAC GAGATGGCGC TGCCAGAGCC CGAACCCGAG
CCGGCTCCGC CACCGCCTCC GCCGCCGGTT CAAAAGGCGC CGATCGAGGA CGACATCGAA
TTCGCCGAAG CAGCGCCGAA GCCGCGCGCG CCGGAGCCGG CCTACGAGCC GCCGCCTGCG
CAGGCCTGGA GCGAAGAGCC GCAGCAGCCG ATCCTGTCGC GGACCACCGC CGCGGCGGTG
GAATCGGCGT TCAATTCGCT CGCCACCACC GTGCTCAGCA ACAATGCCCG GACCCTCGAG
GATCTGGTCA AGGAGATGCT GCGGCCGATG CTGAAGGCTT GGCTCGACGA CAATCTGCCG
ACGCTGGTCG AGCGGATCGT CCGCCAGGAA ATCGAGCGGG TCTCGCGCGG GCGCTGA
 
Protein sequence
MTQPAKAQEP SMEEILASIR RIIADDEAKP ATPAPAPAAV APKPEPPKPA PPPSKPAAMT 
PPPSAPSPVA QAAPPKPAAA PKPAPPPMPA PAESNSQDDI DALLAGLDAG TTEEEVRPPQ
PDGDVLELTD EMALPEPEPE PAPPPPPPPV QKAPIEDDIE FAEAAPKPRA PEPAYEPPPA
QAWSEEPQQP ILSRTTAAAV ESAFNSLATT VLSNNARTLE DLVKEMLRPM LKAWLDDNLP
TLVERIVRQE IERVSRGR