| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2844 |
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| Symbol | |
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| ID | 6410511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3099958 |
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| End bp | 3103065 |
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| Gene Length | 3108 bp |
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| Protein Length | 1035 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642712722 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001991827 |
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| Protein GI | 192291222 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.559797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCTCGA TGTCCGACCC GTTCATCCGG CGGCCGGTCG GCACCACGCT GCTGGCGATC
GGATTGTTTC TGGTCGGCAT GGTCGCCTAT GCGGTGCTGC CGGTGGCAGC ACTGCCGAAC
GTCGATTTCC CGATGATCAT GGTGCAGGCG TCGCGGCCGG GCGCTGCGCC ATCGGTGATG
GCCTCGACCG TCGCGGCACC GCTGGAGCGG CGGCTCGGCG AAATCGCGGG GCTCGATCAG
ATCACTTCGA CGAGTTCGCT CGGCAACACC CGCATTCAGT TGCAGTTCTC GATCGGCCGC
AACGTCGACA GCGCCGCGCG TGATGTCCAG GCGGCGATCA ACGCTGCTGT CAGCGACCTG
CCGACCGACC TGCCGACGCT GCCGAAGTTC CGCAAGTTCA ACTCCGCGGC GGCACCCGTC
TACATCCTGG CGCTGACCTC CAAGACGATG CCGGCGAGCG CGATCTACGA TGTCGCTGAC
ACCGTCTTGG CGCAGCGCAT CTCGCAGGTG CCGGGTGTCG GCGACGTCAC GGTCTCAGGC
GCCGACCAGC CCGCCGTGCG GATCGCACTC AATCCGGTCG CTCTGTCCAA CGCCGGCATC
TCCACTGACG ACGTCCGCAC CGCGATCATC AACGCCAATC CGGTCGGCCC GGTCGGCGCG
TTCGACGGAC CGCGGCTGAC CGAAACGCTC TCGACCAATC CGCAGATGCG CACCGCGGAG
GAGTTCCGCA GCACCGTCAT CAAGAGCGAT GCGAACGGCA CGGTGCGGTT GTCGGATGTC
GCCACCGTCA GCGATGCGAC CCGCAACGCC CGCACCATCG CCTGGTATAA CAAGCAGCCG
GCGGTGATCA TCCAGATCAC CAAGCAGGGC GACGCCAACG TCATCGAGAC CGTCGACCGG
GTCAAGGCGC TGCTGCCCGA GCTGAAGCAG TGGATTCCGG CCGGCGTCGA GATCTCGGTG
CTGGCCGACC GCACCGGCAC GATCCGCGCC AGCGTCGACG ATATGCAGTG GACGCTACTG
GCGACCGCGG TGCTGGTGAT GGCGGTGGTG CTGGTGTTCC TCCGCCGGCT GACGCCGACG
ATCGCGGCTG GCGTGTCGGT GCCGCTGGCG CTCGCCGGCA CCTGTGCCGG GATGTGGATC
AGCGGGTTTT CGATCAACAA TCTGTCGCTG ATGGCGCTGG CGATCGCGGT CGGCTTCGTC
GTCGACGATG CGATCGTGAT GATCGAGAAC ATGTACCGCA ACCTCGAGCG CGGCATGGCG
CCGCTGCCGG CCGCGATCGA GGGCGCCCGG CAGATAGGCT TCACCGTGCT GTCGATCAGC
CTGTCGCTGG TTGCCGCCTT CGCGCCGTTG ATCTTCATGG ACGGCCTGAT CGGACGGCTG
CTGCGCGAGT TCTCGCTGAC GCTGACGTTC GCGATCGTGG TCTCGACCGT GGTGTCGCTG
ACGGTGACGC CGATGATCTG CGCCCACTAC ATCCGCGCCG AAGCGTCGCC GAAACAGACC
TGGTTCGATC GCGCGGTCGA AGGCACGCTG AACCGCATCG TCGGGTTCTA TGCCTGGACG
CTGCGCGGCG TGCTGTCGGT GCCGTGGCTG ACCATCGTGG TGTTCATCGC CACCATCGCG
CTCACGGTGA CGCTGTATAT CAAGGTGCCC AAGGGCTATT TCCCGATCGA CGATTCCGGC
TTCATCATCG GCTCGACCCG CGCCTCCGCC GACATCTCGT TCCAGTCGAT GCGGAAGCTG
CAGGAGGAGC TCGCCGACAT CGTGATGGCC GATCCTGCGG TGAGCGGCGT CGGCTCGGTG
CTGGGTGGTG GCGGACCCGG CGCAGGCGGC GCCAATCGCG GCACGATGTT CATCAATCTG
AAGCCGAGCG CCGAGCGCGA GGGCGTCACC ACCCAGATGG TGATCGACCG GTTGCGCCGG
CAGCTCAGCC GCGTCGCCGG CATCCGGCTG TTCATGTTTG CCGCCCAGGA TCTGCGCGGC
GGCGGCCGCT CCAGCGAATC CAACTATCAG TACACGCTGA GCAGTCCCGA TCTCGACCTG
CTGCAGAAAT GGGCGCCGAT CGTCGCCAAG CGGATGCAGA CGGTCGACGG CATCACCGAC
GTCACCAGCG ATCGCGACGA CGGCGGCCTA GAGCTCACGC TGTCGATCGA CCGCACCCTG
GCGTCGCGGC TGGGCGTGCG GATTCAGGAC ATCGACAACG CGCTCAACAA CGCGTTTTCG
CAGCGGCAGA TCGCCACGAT CTACACCCAG CGCAACCAGT ATCAGGTGGT GCTGGAGATC
GATCCGACCT TCCAGACCGA CCCGACCGAT CTGAAGCGGA TCTATGTCGA CAGTTCGAGC
GGCGATCAGG TGCCGCTGTC GGCGGTGGTG CGCGCCGAGC GCGGGCTGGC GGCGCTGGCG
GTCGCTCATA CCCAGGGCGT GCCGTCGACC ACCGTGTCGT TCAACACGCT GCCGGACGTG
CCGCTGCAGG AGGCGACCGC CAACATTCAG CGCGCGGTCG ACGAACTGCA CATGCCGGAG
GGCATCCGGG GCTCGTTCGA CGGCAATGCC GGCGATTTCC GGGCCACTTC CAACAAGCAG
CCGCTGCTGA TCCTGGCGGC CTTCATCGCG ATGTACATCG TGCTCGGGGT GCTCTACGAG
AGCCTGGCGC ATCCGCTGAC GATCATCTCG ACGCTGCCGT CGGCGGGGCT CGGCGCGCTG
CTGGCGCTGC TGGTCACCGG CACCGAGCTG TCGGTGATCG CCTTCGTCGG CATCATCATG
TTGATCGGCA TCGTCAAGAA GAACGGGATC ATGATGGTGG ACTTCGCGCT GGAGGCCGAA
CGCGAGCGCG GTCTGTCGTC GGCCGACGCC ATCTTCGAAG CCTGCATCGT ACGCTTCCGG
CCGATCCTGA TGACCACGCT GGCGGCGCTG TTCGCGGCGA TTCCGCTGGT GGTCGCGGTC
GGCCCCGGCA CCGAGCTGCG CCGGCCGCTC GGCATCACCA TCATCGGCGG GCTGTTCGTG
TCGCAGGTGC TGACGTTGTA TACGACGCCG GTGATTTATC TGTTGATCGA CCGTGTGCGG
CAGCGGCGCT GGCGCCGCGG CGCGCCGGCC GCAGTGCCGG CAGAGTAG
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| Protein sequence | MASMSDPFIR RPVGTTLLAI GLFLVGMVAY AVLPVAALPN VDFPMIMVQA SRPGAAPSVM
ASTVAAPLER RLGEIAGLDQ ITSTSSLGNT RIQLQFSIGR NVDSAARDVQ AAINAAVSDL
PTDLPTLPKF RKFNSAAAPV YILALTSKTM PASAIYDVAD TVLAQRISQV PGVGDVTVSG
ADQPAVRIAL NPVALSNAGI STDDVRTAII NANPVGPVGA FDGPRLTETL STNPQMRTAE
EFRSTVIKSD ANGTVRLSDV ATVSDATRNA RTIAWYNKQP AVIIQITKQG DANVIETVDR
VKALLPELKQ WIPAGVEISV LADRTGTIRA SVDDMQWTLL ATAVLVMAVV LVFLRRLTPT
IAAGVSVPLA LAGTCAGMWI SGFSINNLSL MALAIAVGFV VDDAIVMIEN MYRNLERGMA
PLPAAIEGAR QIGFTVLSIS LSLVAAFAPL IFMDGLIGRL LREFSLTLTF AIVVSTVVSL
TVTPMICAHY IRAEASPKQT WFDRAVEGTL NRIVGFYAWT LRGVLSVPWL TIVVFIATIA
LTVTLYIKVP KGYFPIDDSG FIIGSTRASA DISFQSMRKL QEELADIVMA DPAVSGVGSV
LGGGGPGAGG ANRGTMFINL KPSAEREGVT TQMVIDRLRR QLSRVAGIRL FMFAAQDLRG
GGRSSESNYQ YTLSSPDLDL LQKWAPIVAK RMQTVDGITD VTSDRDDGGL ELTLSIDRTL
ASRLGVRIQD IDNALNNAFS QRQIATIYTQ RNQYQVVLEI DPTFQTDPTD LKRIYVDSSS
GDQVPLSAVV RAERGLAALA VAHTQGVPST TVSFNTLPDV PLQEATANIQ RAVDELHMPE
GIRGSFDGNA GDFRATSNKQ PLLILAAFIA MYIVLGVLYE SLAHPLTIIS TLPSAGLGAL
LALLVTGTEL SVIAFVGIIM LIGIVKKNGI MMVDFALEAE RERGLSSADA IFEACIVRFR
PILMTTLAAL FAAIPLVVAV GPGTELRRPL GITIIGGLFV SQVLTLYTTP VIYLLIDRVR
QRRWRRGAPA AVPAE
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