| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2843 |
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| Symbol | |
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| ID | 6410510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3096827 |
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| End bp | 3099958 |
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| Gene Length | 3132 bp |
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| Protein Length | 1043 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642712721 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001991826 |
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| Protein GI | 192291221 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGTAT CCGAGCCGTT CATCCGACGT CCGATCGCGA CCTCGCTGCT TGGCGTGGCG
CTGATGATCG GCGGTCTGCT CGGCTATTTG GCGCTGCCGG TGTCGGCCCT GCCGCAGGTC
GATTTCCCGA CCGTGCAGGT GTCGACGCAA TTGCCGGGGG CGAGCCCTGA CGTCGTGGCG
TCGCTGATCA CCGCGCCCTT GGAGCGGCAG CTCGGCCAGA TTCCGTCGCT GACGGCGATG
ACATCGACTT CGTCCTATGG CGTCAGCCAG GTATCGCTGC AGTTCGATCT CAACCGCGAT
ATCGACGGCG CCACTCAGGA CGTGCAGGCG GCGATCAATG CGGCTGCCGG CATTCTGCCG
AAGAACCTGC CGTATCCGCC GGTTTACGCC AAAGTGAACC CGGCCGACGC GCCGGTGATG
ACGCTGGCGC TGACCTCGAC CACGGTGTCG CTGCGCACCA TGAGCGATCT CGCCGACACG
CTGATGGCGC AGCGGCTGGC GCAGATCTCT GGCGTCGGCC GGGTCTCCGT CCTTGGCGGG
CTGAAGCCGG CCGTGCGGGT GCAGGCCGAT CTCGCCCGGC TTGCCGCCTA CGGCATCTCG
ATGGAAGACC TGCGCACGGC GATCGCCAAC GCCAACGTGT CGGGGCCGAA GGGCTCGCTC
GACGGCGCGC AGCAGGCTTA CACCATTGCG GCCAACGACC AGATTGCCGC CGCCGATGCC
TACCGGCCGA TCATCGTGGC GTACCGCAAC GGCTCGCCGG TGACGATCGG CGACGTCGCG
CAGATCGTCG ACGGGCTGGA GAATGAGCGC ACCGGCGCCT GGTACCAAGG CACGCCTTCG
GTGATCCTCG ATATTCAGCG GCAGCCCGGC GCTAACGTCA TCGACGTGGT CAAAGGCATC
CGCGCCGAGA TCCCGCGGAT CCAGCGGCTG GTGCCGACTG GCGTCAAGCT CACCGTGGTC
AGTGATCGCA CCGAGACGAT CCGGGCTTCG GTGCACGACG TGCAGTTCAC GCTGCTGCTC
AGCGTGGTGC TGGTGACGCT GGTGGTGCTG CTGTTCCTGC GCTCGATGCG CGCCACAATC
ATTGCCGGCG TGGCGCTGCC GCTGTCGCTG ATCACCAGCT TCGGTGTGAT GTATTTCATG
GGCTTCAGCC TCGACAATCT GTCGCTGATG GCCCTGACGA TCGGCACCGG CTTCGTCGTC
GACGACGCCA TCGTGATGAT CGAGAATATC GTCCGTCACA TGGAGGACGG CGAGAGCCCG
ATGCAGGCCG CCCTGAAGGG CGCCAGCGAG ATCGGCTTCA CCGTGATCTC GCTGACGATG
TCGCTGATGG CGGTGTTCAT CCCGCTATTG TTCATGTCCG GGCTGGTCGG CCGGATGTTC
CGCGAATTCG CCCTGACGCT GACGATCGCG GTCGTCACGT CTGCGATCGT GTCGCTGACG
CTGACGCCGA TGATGTGTTC GCGGTTGCTC AAGCACGCCC GCGACGAGCG CCAGGTGCCT
GGGCTTGCCG CGATCACCGC GTGGATCGAT CGCGGCGCCG AGGCCTACCA TCGCAGCCTG
TTGTGGGTGC TGAAGCATCA GCGCGCGACG CTGGTGGTGA CCTTCCTGAC CATCGCGGCG
ACGCTGATAT TGTATGCGAT CGCGCCGAAG GGTTTCCTGC CGCTGCAGGA CACCGCCTCG
ATCACCGCGG TGACGGAAGC GGGACCGGCG GTGTCGTTCG CCGAGATGAA GGCGCGGCAG
ACCGAGACCG CGCAGGCGAT CGAAGCCGAT CCAGACGTCG TCGGCGTGGT GTCGGTGATC
GGCGCCGGCT CGGTCAATCC GACGCCGAAT GTCGGCCGGC TGGTGCTGAC GCTGAAGCCG
CGGGGCGACC GCAAGTCCGA CGTCGGCGAG GTGATCGAGC GGCTGAAGCA GCGCGTCGCC
GGCATTCCCG GCATGACCGT GTACTTCCAG GCCGTGCAGG ACGTGCAGAT TTCGACCCAG
GCCAGCCGCT CGCAATATCA GTACACTCTG ACCGCGACTG ACGCCGCGCT GCTGTCGCAA
TGGGCCAATC GGTTGCTCGC CGAACTGCGC CGCGATCCGC TGTTCCGTGA CGTTTCCACC
GAAGCGCAGG AGGGCGGCTT GCGGGCCGCG CTCGACGTCA ACCGCGAACG CGCCGGCCAG
CTCGGCGTCA GCGTTCAGGC GATCAACGAC ACGCTCAACG ACGCATTCGC CCAGCGGCAG
ATTTCGACGA TCTACGGCCA GGCCAACCAG TACCGCGTCG TGCTGGAAGC GATGCCGGTC
TATCAGCAGG ACCCGTCGAT CCTGTCCAAG TTGTATGTGC CGGGCAATGC CGGCGCCCAG
GTGCCGATCT CGGCAGTCGC CGAGTTGAAG CGCACCATCG CGCCGCTGGC GATCTCGCAC
CAGGCGCAGT TCCCGTCCGT TGCGATGAGC TTCAATCTCG CGCCCGATGC GTCGCTCGGC
GAGGCGTTGA AGCGGATCGA GACCATCGAG AAGCAGATCG GGATGCCCGG CAGCATCGTC
GGCGTGTTCT ATGGCGATGC CGCCGAATTC TCCAAGGCGC TCGCCGGCCA ACCGTGGCTG
ATCCTGGCCG CGATCGTCGC GATCTACATC GTGCTCGGCG TGCTGTACGA GAGCTACATT
CACCCGATCA CCATCCTGTC GACGCTGCCG TCGGCCGGCG TCGGCGCGAT CCTGGCGTTG
ATGCTGTTCG GCCAGGATCT GTCGGTGATC GGGCTGATCG GCATCATCCT GCTGATGGGC
ATCGTCAAGA AGAACGCCAT CATGATGATC GACTTCGCGC TCGAAGCCGA GCGCGGCCAG
CGGATGTCCT CTTACGAGGC GATCGTGCAG GCGTGCCGGC TGCGCTTCCG GCCGATCATG
ATGACGACGC TGGCGGCATT GTTCGGCGCG CTGCCGCTGG CGATCGAAAG CGGCACCGGC
TCCGAGCTGC GGTTTCCGCT CGGCATCTCG ATCATCGGCG GCCTGCTGCT CAGCCAGTTA
CTGACGCTGT ACACCACACC TGTGATTTAT CTGGCGCTCG ACCGCATCAA TCGAAAGCTG
GAGCGGGCGC TGCCGCCGGT TCCGCCGGCG ACGCCGTCAC CGCCGCTGGC CGGCGTAGGG
GAGGGGCTGT AA
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| Protein sequence | MGVSEPFIRR PIATSLLGVA LMIGGLLGYL ALPVSALPQV DFPTVQVSTQ LPGASPDVVA
SLITAPLERQ LGQIPSLTAM TSTSSYGVSQ VSLQFDLNRD IDGATQDVQA AINAAAGILP
KNLPYPPVYA KVNPADAPVM TLALTSTTVS LRTMSDLADT LMAQRLAQIS GVGRVSVLGG
LKPAVRVQAD LARLAAYGIS MEDLRTAIAN ANVSGPKGSL DGAQQAYTIA ANDQIAAADA
YRPIIVAYRN GSPVTIGDVA QIVDGLENER TGAWYQGTPS VILDIQRQPG ANVIDVVKGI
RAEIPRIQRL VPTGVKLTVV SDRTETIRAS VHDVQFTLLL SVVLVTLVVL LFLRSMRATI
IAGVALPLSL ITSFGVMYFM GFSLDNLSLM ALTIGTGFVV DDAIVMIENI VRHMEDGESP
MQAALKGASE IGFTVISLTM SLMAVFIPLL FMSGLVGRMF REFALTLTIA VVTSAIVSLT
LTPMMCSRLL KHARDERQVP GLAAITAWID RGAEAYHRSL LWVLKHQRAT LVVTFLTIAA
TLILYAIAPK GFLPLQDTAS ITAVTEAGPA VSFAEMKARQ TETAQAIEAD PDVVGVVSVI
GAGSVNPTPN VGRLVLTLKP RGDRKSDVGE VIERLKQRVA GIPGMTVYFQ AVQDVQISTQ
ASRSQYQYTL TATDAALLSQ WANRLLAELR RDPLFRDVST EAQEGGLRAA LDVNRERAGQ
LGVSVQAIND TLNDAFAQRQ ISTIYGQANQ YRVVLEAMPV YQQDPSILSK LYVPGNAGAQ
VPISAVAELK RTIAPLAISH QAQFPSVAMS FNLAPDASLG EALKRIETIE KQIGMPGSIV
GVFYGDAAEF SKALAGQPWL ILAAIVAIYI VLGVLYESYI HPITILSTLP SAGVGAILAL
MLFGQDLSVI GLIGIILLMG IVKKNAIMMI DFALEAERGQ RMSSYEAIVQ ACRLRFRPIM
MTTLAALFGA LPLAIESGTG SELRFPLGIS IIGGLLLSQL LTLYTTPVIY LALDRINRKL
ERALPPVPPA TPSPPLAGVG EGL
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