| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2832 |
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| Symbol | |
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| ID | 6410499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3083934 |
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| End bp | 3084995 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642712710 |
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| Product | extracellular solute-binding protein family 3 |
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| Protein accession | YP_001991815 |
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| Protein GI | 192291210 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.169864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGCG TCTCTATTCT TGTCGCCCTC GCTATCGCTG TCGGTCTGTC GCCTCAGGTC
GCCGGCGCGC AAAATCCCAA GGCCGGATCG ACGGCGGGCG CAGAGAAAAA GAAGACTACG
CTTGAGATTG TTCGGGAAAA CGGCGCTCTG TCCTGCGGCG TCAGCCAGGG ACTGCCCGGT
TTTTCGGCGC CCGACGACAA AGGCAATTGG GCCGGCCTCG ACGTCGATGT CTGCCGCGCG
ATTGCGGCCG CGGTGTTCGA CGACCCCAGC AAGGTGAAGT TCGTGCCGCT GTCGGCGAAG
GATCGCTTCA CCGCGCTGCA GTCCGGTGAG ATCGATGTGC TGTCGCGCAA TACCACCTGG
ACGCTGTCGC GCGACACCTC GCTCGGCGTC AGCTTCGCTG GCGTCAGCTA TTATGACGGC
CAGGGCTTCA TGGCCAAGAA GTCGCTCAAG GTGAATTCGG CGCTGGAACT GAACGGCGCC
TCGATCTGCG TGCAGACCGG CACCACCAAC GAGCAGAACG TTGCCGACTA TTTCAAAGGC
AACAACATGA AGTACGAGGT GATCGCGTTC GCCAATGCCG ACGAAGCGGT CAAGGCCTAT
GAGTCCGGTC GTTGCGACGT GTTCACCTCC GACGTCTCGC AGCTCTACGC CCAGCGCCTA
AAGCTGGCGA CCCCGGCTGA TCATGCTGTG CTGCCGGAGG TGATCTCCAA GGAGCCGCTC
GGCCCGCTGG TTCGCCACGG CGACGATCAG TGGTTCGACA TCGTCAAGTG GACGTTGTTC
GCGCTGGTCA ATGCCGAAGA GCTCGGCGTC ACCCAGAAGA ACGTCGACGA AATGGCCAAG
TCGGACAAGC CCGAGCTGAA GCGGGTGTTC GGCACCGACG GCAATCTTGG CGAACAGCTC
GGCCTGACCA AGGATTGGGT CGCCCGCATC GTCAAGGCGA CCGGCAATTA CGGCGAATCG
TTCGAACGCA ATGTCGGCTC CGGCTCGAAG CTGGAGATCG CGCGCGGCCT CAACAAGCTC
TGGAACAAGG GGGGCATCAT GTACGCCCCG CCGATCCGCT GA
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| Protein sequence | MKRVSILVAL AIAVGLSPQV AGAQNPKAGS TAGAEKKKTT LEIVRENGAL SCGVSQGLPG
FSAPDDKGNW AGLDVDVCRA IAAAVFDDPS KVKFVPLSAK DRFTALQSGE IDVLSRNTTW
TLSRDTSLGV SFAGVSYYDG QGFMAKKSLK VNSALELNGA SICVQTGTTN EQNVADYFKG
NNMKYEVIAF ANADEAVKAY ESGRCDVFTS DVSQLYAQRL KLATPADHAV LPEVISKEPL
GPLVRHGDDQ WFDIVKWTLF ALVNAEELGV TQKNVDEMAK SDKPELKRVF GTDGNLGEQL
GLTKDWVARI VKATGNYGES FERNVGSGSK LEIARGLNKL WNKGGIMYAP PIR
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