| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2694 |
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| Symbol | |
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| ID | 6410357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 2922611 |
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| End bp | 2924341 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642712569 |
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| Product | periplasmic protein-like protein |
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| Protein accession | YP_001991678 |
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| Protein GI | 192291073 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3904] Predicted periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.361508 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGAAG ATGCTTGGTA CTACGTCAAC TCAGGAGAAC GATTCGGTCC GGTCAGCTTG
GCGAACCTAA AGAGACTGAT TTCCTCGCTT CCCAACCCCG AAAGGTGCTT GGTTTGGTCT
GCAAAGCTCC CGGACTGGAC TGCAGCCGGA GACATCAACG AACTCCAGCC TTTGACGCCC
CCACCTATTC CTAACGAACC GCAGGAGCCC CCCCGCCCCG AATGGCGAGT TCGTTGGTGG
TGGTACGTTG TCGCCCTTTT CTGTCTTGGC TCGATTGGAA GCCAAGACGG ACGAACGGCG
ATGCAATGGG CATCGCGAAA TCGTGCTGAG CGCCGCAGGA TCAGATACGG CAATTCGGTG
GTCGACGACA AGAGGCCGAA TGTCGCAACT GCGGCCCCAT TACCATCAAG CAACTACATC
ACGCGTCACT GGCGAGGCGA CCTATCACTT CCAGTTTCGT ATTGGGTGAA TGGATTCCTA
GGAAATATCG CTACAGCCGG CGCAATCATC TTTCTCGGCA AAGGCCTCGA TTTCAAAGAT
GAATTTCGCC CTGAAATAGC GCTTGCGAGT GCGACCGCCA TTTGGGCCAC GATAGTTCTT
GTAGCGACCT GGCAGGTTGT CGGCGTTTGG CGTTCAGCAA CTCACTACTC AGAACAACAT
GTTCGGAGCT ATTGGGGCGG TATTGCAAAG TTCGTAGTGT TCCTCGCTGC CCTAAAGCTC
GGTGGCCAGA TCCTAACAAA TGCGATCCCT CAAATTACTG AATTTGCTAG AATCTATGCC
GGAGACGCTA GCGTAGGAAA ATACAAATTC CACGTTATCA ACGACGGCCG AGAACTTGAA
TTAGTAGGGG GCATCACATT TGGAGCTGCC AAAGATCTCG AATCCTTTGC AGACGCTCTG
AGCTCCCTCA AAACAGTTCG ATTGACCTCG AATGGAGGGC GGATCTCCGA AGCAGCGCGA
ATCGCGGCGC AGATTAGAAA GAGAGGTCTG AACACCTACG TTCCGACCTA TTGCGTATCG
GCCTGCACTA TTGCCTTCCT AGGCGGCCAA CAACGGCTGG TTGGAACAAG CGCAAAGCTG
GGATTCCACC AGCCTGATTT CCCAGGGATA TCAGCAGTAG ATCGGAGGGA ATTGATCGCG
GAAGAGGAGC GTAGATTAAC CTCATTGGGG GTTAGTCCAG CTTTCGCTCG AAAAGTGAAT
TCCACGCCTC CAAGCAACAT GTGGTTTCCG ACTCTTTCAG AGCTCAAGTC AGGGGGCCTC
GTCACGAAGA CCTTGGACAT AGATGACAGT CCGGTTTCTT ACGAGGCCTT TGTGACCCGG
GAAGGTAAGT TTTCTATCGA TTTCGGTGGC GTGCCTAAAT TGACCAAAGG CACAGGCCGG
CCGGCTAATG GTGTCTCATA CGACTCCTAC ACTTGGTCAA CGGGTGGAAC GACCGTATAC
AAAGCGGTTG TGATGTTCGT CTATTCTGAG AGCATCAAAG TTAGCTTTGA TGGCGCTATA
GCTGGCGCTG CACAAAACGC AAAAGCCCAA CTGGTCAAAG AGCAGCCAGT GAAACTGGCC
GATTTCGAGG GTCGAGAAGC TTTCCTGGAA ACGCAAGACT CGATGGAAAT TAGGTTGAGA
TACTTTTTTA TCGGTGGCCG CCTATACCAA CTAATGGTAG TCGCCCATTT GGGGGAAACC
ACAACGCCAG CAGCCAATGC GTTCTTTGAC TCGTTTCATT TCACATTCTG A
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| Protein sequence | MSEDAWYYVN SGERFGPVSL ANLKRLISSL PNPERCLVWS AKLPDWTAAG DINELQPLTP
PPIPNEPQEP PRPEWRVRWW WYVVALFCLG SIGSQDGRTA MQWASRNRAE RRRIRYGNSV
VDDKRPNVAT AAPLPSSNYI TRHWRGDLSL PVSYWVNGFL GNIATAGAII FLGKGLDFKD
EFRPEIALAS ATAIWATIVL VATWQVVGVW RSATHYSEQH VRSYWGGIAK FVVFLAALKL
GGQILTNAIP QITEFARIYA GDASVGKYKF HVINDGRELE LVGGITFGAA KDLESFADAL
SSLKTVRLTS NGGRISEAAR IAAQIRKRGL NTYVPTYCVS ACTIAFLGGQ QRLVGTSAKL
GFHQPDFPGI SAVDRRELIA EEERRLTSLG VSPAFARKVN STPPSNMWFP TLSELKSGGL
VTKTLDIDDS PVSYEAFVTR EGKFSIDFGG VPKLTKGTGR PANGVSYDSY TWSTGGTTVY
KAVVMFVYSE SIKVSFDGAI AGAAQNAKAQ LVKEQPVKLA DFEGREAFLE TQDSMEIRLR
YFFIGGRLYQ LMVVAHLGET TTPAANAFFD SFHFTF
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