| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2684 |
|---|
| Symbol | |
|---|
| ID | 6410347 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 2912923 |
|---|
| End bp | 2914305 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642712560 |
|---|
| Product | phenylacetate--CoA ligase |
|---|
| Protein accession | YP_001991669 |
|---|
| Protein GI | 192291064 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1541] Coenzyme F390 synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACC CCAACAATCC ACTCGCCATC GACAGCCGCG ACCCTGCCGA GTACCAGGCC
GCGCTCGGCC GGCACCGCTT CGAGAAACTG AAGCAGCAGA TCCGCCATGT CTGGAGCAAT
GTCGATTATT TCCGCCCGAA GCTGATCGAA GCGGGCGTGT CATCGCCGGA GGATATTCGC
TCGCTCGACG ATTTCCGCCG CCTGCCGGCG ATGCTCGACA AGGTCAGCCA CCGCCAGTCG
CAGGAGGAGT CGCTGGCGCG CTACGGCCAT CCGTTCGGCC TGCATCTGAC GGTGCCGCTC
GACCAGGCGG TGCATCTGGC CGCCACGTCG GGCACCACAG GGCAGCCGAC GTTCTATGTG
TTCAGCCCGC GCGATCTCGA AATTTCCCAC CGTGTGCTTG GCCGGCTGTT CGCGCAAGCC
GGCATCCGCC CGGGCGACAC CACGTTTCAC GCTTTCGGCT TGTCGCTGTG GCTCGCCGGG
GTCACCTATG TGCAGGCGCT GGAGGCCTAC GGGGCGCGCC CGGTCGCGCT CGGTGCCGAG
GCCGGTGTGC CGAAGATCCT TCGCTACATC GAGTTCACGC GGCCGACCGC ACTGTTCGCC
ACTCCCTCGA TGGTCAATCA GCTGATCGAG CGCGCGCCGA AGGAGATCGG CAAGCCGGTG
GCGGCGCTCG GGATCAAGCG AGTGTTGTGC GCCGGCGAGC CGGGGGCGGG GCTTCCGGCG
TTTCGCCAGC GAGTGCGCGA GGAGTTCGGC GCCGAGGTGT TCGATTTCAT GGGCGGTGCC
TGGCACAACG CCGCGCTGTC CTGCGCCAGC CCCGACTATC ACGGCATGCA CTATCTCAGC
GACGACACCT GCTTCCGCTA TGATCTGATC GATCCGGCGA CCAAGCAGCC GATCCCGCTG
ACCGATGGTG CGGTCGGCGA GGCGATCCAT ACCGGGCTCG ACTATCAGGC TGCGCCCGCG
TTCCGCTACG CCACCGGTGA CATCCTCAAG ATCCATGTCG GCACCTGTCC GGGATGCGGC
GCGTTCGGCA CCCGTATGGA GGTGGTCGGC AGGGTCGACG ACATGCTGGC GATCAAAGGC
GTCAAAGTGT ACCCGGCGGC GATTCAGAAC GTCGTGCTGC AATTCCAGCC GCGTGTGTCG
GGCGAGCTGC GGATCCGGCT CGACCGGCCG CCGCCAAAGG TCGAACCCCC GCTGCGGCTC
GCGATCGAAG CTGCGCCGGA TCTGCCGGAG GCGGCATGGG CGGATCTCGC CGGTGACATC
GAACATCGCG TTCGCGAGTT ACTGACGTTC CGCCCCGTGG TCGACATCTT GCCGCACGGC
AGCCTGCCGC GCTCAGGCCA GAAGACCAAG CTGATCGAGA TCGCCAGTCA GGCGGCGAAC
TGA
|
|---|
| Protein sequence | MTDPNNPLAI DSRDPAEYQA ALGRHRFEKL KQQIRHVWSN VDYFRPKLIE AGVSSPEDIR
SLDDFRRLPA MLDKVSHRQS QEESLARYGH PFGLHLTVPL DQAVHLAATS GTTGQPTFYV
FSPRDLEISH RVLGRLFAQA GIRPGDTTFH AFGLSLWLAG VTYVQALEAY GARPVALGAE
AGVPKILRYI EFTRPTALFA TPSMVNQLIE RAPKEIGKPV AALGIKRVLC AGEPGAGLPA
FRQRVREEFG AEVFDFMGGA WHNAALSCAS PDYHGMHYLS DDTCFRYDLI DPATKQPIPL
TDGAVGEAIH TGLDYQAAPA FRYATGDILK IHVGTCPGCG AFGTRMEVVG RVDDMLAIKG
VKVYPAAIQN VVLQFQPRVS GELRIRLDRP PPKVEPPLRL AIEAAPDLPE AAWADLAGDI
EHRVRELLTF RPVVDILPHG SLPRSGQKTK LIEIASQAAN
|
|---|
| |