Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2661 |
Symbol | |
ID | 6410324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 2891057 |
End bp | 2892214 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642712537 |
Product | putative aliphatic amidase expression-regulating protein, AmiC |
Protein accession | YP_001991646 |
Protein GI | 192291041 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.547475 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGAAGC GGCTGCGCAT CGGTGTGATG TTTTCGACGA CCGGCTCCTA CGGGGCGGTC GGACGCACCA TGCTCAACGG CGTGATGCTC GGCCTCAGCG AAGTGGCAGC CAGCGGAAGC GGACCGGAGA TCGAGCCGGT CATCGTCAAT CCTGGCGGCG ACCTGTCGCA GTATCGCGCG CTGGCACACG ACCTGCTGGC CTCCGGCGTC CGGCAGGTGG TCGGCTGTTA CACCTCGTCA AGCCGCAAAG AGGTGATTCC GTGCTTCGAA AAGCACGATG GCCTGTTGTG GTATCCGTCG CATTATGAGG GCTTCGAGAG CTCCGACAAT GTCATCTACA CCGGCGCCTC GCCGAACCAG CACGTGCTGC CGCTGGTCGA TTATCTCGCC GCCAAGCACG GCAAGCGCGC GTTCTGCATC GGCTCGAACT ATATCTGGGC GTGGGAGAAC AACCGGATCT TCCGCGAAGC GTTGATAGCG CGCGGCGGCA CGGTGCTGGC CGAGCGCTAT CTTCCGGTCG GGGACACCGA TGTCGATCGA GTCATCGCGG CGATCCTGGA GCAGCGTCCG AATTTTGTTT TCAACAATCT GATCGGCACG AGCGCCTATG CGTTCTTCCG CGCGTTTCGT GCCGCGTGCC TCTCGCGCGG CATCGACCAG GCTGCCGAGA TCCCGGTGGC GAGCTGCACG CTTGCCGAGC CGGAGCTGGC TGAGATCGGC GCCGAGGCTG TCGACGGACA TCTGTCGTCG AGCGTGTATT TTGCTTCGCT GGCAGGGGCG GCCAATGACG CGTTCACCCA AGCTTATGAG ACGAAATTTC CGGACGCGCC GCCGACCTCG GCGGATGCGG AGGCCTGCTA CATCGCGGTC AAGCTGCTCG CCGCCGCTCT GCAACAGGCC GGCACCGATG AGGCCGGCGC GGTGCGCGCG GCGGTCGCCG ATCAGCGCCT GATCGCTCCC CAGGGCGAAG TGCGGATCGA TCCGCAGACC TATCACGCCT GGCTGACGCC GCGCATCGGT CGGTCGACCG CGGCGGGTCA ATTCGAAGTG CTGCTCGAAG CGCCGGAGCC GATCGCGCCT GATCCGTATC TGGTGCAAAC CTCGCCGCGG TTTGCCGCCG CCATGCGTTC TCCATTGTTG AGGCTGGTGA AGTCATGA
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Protein sequence | MTKRLRIGVM FSTTGSYGAV GRTMLNGVML GLSEVAASGS GPEIEPVIVN PGGDLSQYRA LAHDLLASGV RQVVGCYTSS SRKEVIPCFE KHDGLLWYPS HYEGFESSDN VIYTGASPNQ HVLPLVDYLA AKHGKRAFCI GSNYIWAWEN NRIFREALIA RGGTVLAERY LPVGDTDVDR VIAAILEQRP NFVFNNLIGT SAYAFFRAFR AACLSRGIDQ AAEIPVASCT LAEPELAEIG AEAVDGHLSS SVYFASLAGA ANDAFTQAYE TKFPDAPPTS ADAEACYIAV KLLAAALQQA GTDEAGAVRA AVADQRLIAP QGEVRIDPQT YHAWLTPRIG RSTAAGQFEV LLEAPEPIAP DPYLVQTSPR FAAAMRSPLL RLVKS
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