| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2650 |
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| Symbol | |
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| ID | 6410312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2874236 |
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| End bp | 2876602 |
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| Gene Length | 2367 bp |
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| Protein Length | 788 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642712526 |
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| Product | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase |
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| Protein accession | YP_001991636 |
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| Protein GI | 192291031 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
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| TIGRFAM ID | [TIGR01371] 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.521144 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTCTC ACACAGTTAG TACGTCTCTT GCCGTCGCCA CGCTCGGCAC GCCGCGGATT
GGTCCGCGGC GAGAACTGAA ATCCGCGCTC GAGAGTTTCT GGGCCGGAAA ATCGACCGAA
GCCGATCTTC TGAAAGTCGC GGCCGCGTTG CGGGCGGCGA ACTGGGCCCG GCAGAGCGCG
CGGGGCGTCA GTGTGATTCC GTCGAACGAC TTCTCCCTCT ACGATCAGGT CCTCGACACC
AGCGTGATGG TCGGCGCGAT CCCCGAGATC TATGGGTGGA GAGGGGGCCC GGTCTCACTT
GCTACCTATT TCGCCATGGC GCGCGGCACC CAGGCCGAAA TCGCAGGGCA TGGCTGCGCC
AATGGCCATC ACCACGGCGA TTCGACACCG CAGGGCGTTC CGGCTCAGGA AATGACCAAG
TGGTTCGATA CGAACTACCA CTACATGGTT CCGGAATTCT CCGCCGGGCA GAGCTTCCAA
CTCGCATCGC TCAAGCCGCT CGAAGAGTAT CGCGAGGCGA AGGCGCTGGG CTATGACACG
CGTCCGGTGC TGCTCGGGCC AGTCACCTAT CTGAAGCTCG GAAAGAGCGC GGATGCCAGG
CTCGACGTGC TGTCGCTGCT GCCGAAGCTG GTGCCGGTCT ATATCGAGAT CCTCGGCCGG
CTTGCGGCCG CGGGGGCGAA GTGGGTCCAG CTCGACGAGC CGGCGCTGGT GCTCGATCTC
GACGATCGCG AGCGCCTGGC GTTTCGCGAT GCCTACGGCC AGATCGCGCG CGAGCTGCCG
CATCTCGATA TTATGCTGAC GACCTATTTC GGCGGGCTCG GCGACAATCT CGACACCGCG
CTGGCTCTGC CGATCGCTGG TCTGCATCTC GATTTGGTTC GTGCGCCGAA GCAAATCAAC
GCTGTCATTG CGAAGGGACC GAAAGATCTG GTGCTGTCGC TCGGTGTGGT CGACGGCCGC
AATATCTGGC GCGCAGACCT GCCGGACTTG CTCGACCGCG TCGAGCCGAT CGTGCAGCAG
CGCGGGGCCG AACGCGTGCA GCTTGCGCCG TCCTGCTCGC TGCTACATGT GCCGGTCGAT
CTCGAACTTG AAACTGGGCT CGATCCTGAC CTGAAGAGCT GGCTGTCGTT CTCGCTGCAG
AAGATGGGCG AACTATCGAC GCTGAGCGGG GCCTTAAGCG GCGACCGGGC TGCGGTGCAG
GACCAGTTGT CTGCGTCAGC GAAGGCGGCC GCGACCCGAC GCAAGTCGCC CAAGGTGCAC
GACATGGCGG TGAGCAGTCG TGCCGCGGCG GTCACCCCGG CGATGACCCA GCGCAACAGC
GGATTTGCCG CGCGTGCGAC CTTGCAGCAT CAGCGGCTAC AACTGCCGGC GTTTCCGACG
ACCACGATCG GGTCGTTTCC GCAGACTGCT CAGATCCGCC AGGCCCGCGC GGCACATGCC
AAGGGTGCCA TCTCGGATGC GGACTACAAT ACTTTCCTGC GAGGCGAGAC CGCCCGGGCG
ATTCAGTGGC AGGAGAAGGT CGGCCTCGAC GTCCTGGTCC ACGGCGAGTT CGAACGCAAC
GACATGGTGC AGTATTTCGG CGAGCAGCTC TCTGGCTTCG CCTTCACCAA GGAAGGTTGG
GTCCAGAGCT ATGGCTCGCG TTGCGTTCGG CCGCCGATCC TGTTTGGCGA TGTCTCGCGG
CCGAAGCCGA TGACGGTCGG CTGGTGGAAG TATGCGCAGT CGCTCACCGG CAGGCCGATG
AAGGGCATGC TGACCGGGCC TGTGACGATC CTGAACTGGT CGTTCGTCCG GGATGACGTT
CCGCGCAGCA CGGCGTGCCT TCAGATCGCG CTCGCTATCC GCGATGAAGT CGGCGATCTC
GAACAGGCAG GCGCCACGAT GATCCAGATC GACGAGGCGG CGTTGCGCGA AGGCTTGCCG
CTGCGTCGCT CCGAATGGAA GGGATATCTC GATTGGGCGG TCGAGTGCTT CCGTCTGTGC
TCGTCCGGCG TCAAGGACGA GACGCAGATT CATACGCACA TGTGCTACTC GGAGTTCAAC
GACATCATCG ATGCGATCGC CGCGATGGAT GCCGACGTGA TCTCGATCGA GACGTCGCGC
TCCAAGATGG AGCTGCTCGA CGCGTTCAAG ACCTACAAAT ATCCGAACGA GATCGGTCCC
GGCGTCTACG ACATCCATTC GCCCCGGGTG CCGTCGGTCG AGGAAATGAC CACATTGCTC
CAGCTCGCGC GTCAGCGGCT GTCCGATGGG CAATTGTGGG TCAATCCGGA TTGCGGGCTG
AAGACGCGTG GCTGGGATGA GGTCCAGGGG GCGCTCGTCA ACATGGTCGA AGCAGCGCGG
CAGATTCGCC AGGTCAGTGC GGGATGA
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| Protein sequence | MSSHTVSTSL AVATLGTPRI GPRRELKSAL ESFWAGKSTE ADLLKVAAAL RAANWARQSA
RGVSVIPSND FSLYDQVLDT SVMVGAIPEI YGWRGGPVSL ATYFAMARGT QAEIAGHGCA
NGHHHGDSTP QGVPAQEMTK WFDTNYHYMV PEFSAGQSFQ LASLKPLEEY REAKALGYDT
RPVLLGPVTY LKLGKSADAR LDVLSLLPKL VPVYIEILGR LAAAGAKWVQ LDEPALVLDL
DDRERLAFRD AYGQIARELP HLDIMLTTYF GGLGDNLDTA LALPIAGLHL DLVRAPKQIN
AVIAKGPKDL VLSLGVVDGR NIWRADLPDL LDRVEPIVQQ RGAERVQLAP SCSLLHVPVD
LELETGLDPD LKSWLSFSLQ KMGELSTLSG ALSGDRAAVQ DQLSASAKAA ATRRKSPKVH
DMAVSSRAAA VTPAMTQRNS GFAARATLQH QRLQLPAFPT TTIGSFPQTA QIRQARAAHA
KGAISDADYN TFLRGETARA IQWQEKVGLD VLVHGEFERN DMVQYFGEQL SGFAFTKEGW
VQSYGSRCVR PPILFGDVSR PKPMTVGWWK YAQSLTGRPM KGMLTGPVTI LNWSFVRDDV
PRSTACLQIA LAIRDEVGDL EQAGATMIQI DEAALREGLP LRRSEWKGYL DWAVECFRLC
SSGVKDETQI HTHMCYSEFN DIIDAIAAMD ADVISIETSR SKMELLDAFK TYKYPNEIGP
GVYDIHSPRV PSVEEMTTLL QLARQRLSDG QLWVNPDCGL KTRGWDEVQG ALVNMVEAAR
QIRQVSAG
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