| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2601 |
|---|
| Symbol | |
|---|
| ID | 6410263 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 2812084 |
|---|
| End bp | 2813256 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642712479 |
|---|
| Product | Cystathionine gamma-synthase |
|---|
| Protein accession | YP_001991589 |
|---|
| Protein GI | 192290984 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.158443 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAGA CCACCAACCT GCGGCAGCGC GGGGCCAACA CCCGCGCGGT GCACGGCGGC
CAGCATTTCG ATCCGGCGAC CGGTGCGGTG ACGACCCCGA TCTACGCCAC CTCGACCTTC
GTCCAGTCGG CGCCGGGCGT GCACAAGGGC TACGAATACG CGCGCTCGCA GAACCCGACG
CGCGCCGCGT TCGAGGCCGC GATCGCCGAC GCCGAGCGCG GCCACGCCGG TTTCGCTTTC
GCCTCCGGCC TCGCGGCCGA GGCGGCGCTC TTGGAGATCG CCGGGCAGGG CAGTCACATC
GTCGCGTCGG ACGACCTCTA TGGCGGAAGC TGGCGGCTGT TCCATCGGGT GCGCAGCCAT
TCCGCCGGCC TGACGATCAC CCATGTCGAT CCGGCTAATC TCAACGCGCT GCGCGACGCC
ATCCAGCCGA ACACGGCCTT CATCTGGATC GAGACACCGA GCAACCCGAC GCTGCGCCTC
GCCGATCTCG AAGCGATCGC GGCGATCGGC CGCGAGCGCG GCGTGCTCAC CGTGGTCGAC
AACACCTTCG CATCGCCTGC GGTGCAGCGC CCGCTTGAGC ACGGCATCGA CATCGTGGTG
CATTCGGTGA CGAAATACAT CGGCGGCCAT TCCGACATCG TCGGCGGCGC GATCGTGGTG
CGTGATCCGG ACTTGGCGCA GAAGCTGCAG TTCCTGCAGA ACGCCACGGG AGGCATCCTC
GATCCGTTCT CCAGCTTCCT GGCGCTGCGC GGCATCAAGA CGCTGCCGCT GCGGGTCCAG
CGCCACAGTT CGAATGCGCT GGCGGTCGCC CGCTGGCTCG ACGCCCATCC CAAGATCGAG
CGGGTGGTCT ATCCCGGGCT CAACAGCCAT CCGCAGCACG CGCTCGCGGT GCGCCAGATG
GATGGCGGCG GCGGCATGGT GGCAGCTTAT CTGAAGGCCG ACGAGCAGCA GGTCGTCGAT
GTGCTGAGCC GCTTCAGGTT GTTCGCGCTG GCGGAAAGTC TGGGTGCCGT GGAGAGCCTG
GTCGGGCAGC CGTGGACCAT GAGCCATGGC TCACTGCCGG AAGCCGATCG GCTAGCGCGC
GAGATCACGC CCAATCTGAT CCGGCTGTCG ATCGGTATCG AAGACGTCGA GGACCTGACC
GACGATCTCG AGCAGGCGCT GTCCATCCTG TGA
|
|---|
| Protein sequence | MDKTTNLRQR GANTRAVHGG QHFDPATGAV TTPIYATSTF VQSAPGVHKG YEYARSQNPT
RAAFEAAIAD AERGHAGFAF ASGLAAEAAL LEIAGQGSHI VASDDLYGGS WRLFHRVRSH
SAGLTITHVD PANLNALRDA IQPNTAFIWI ETPSNPTLRL ADLEAIAAIG RERGVLTVVD
NTFASPAVQR PLEHGIDIVV HSVTKYIGGH SDIVGGAIVV RDPDLAQKLQ FLQNATGGIL
DPFSSFLALR GIKTLPLRVQ RHSSNALAVA RWLDAHPKIE RVVYPGLNSH PQHALAVRQM
DGGGGMVAAY LKADEQQVVD VLSRFRLFAL AESLGAVESL VGQPWTMSHG SLPEADRLAR
EITPNLIRLS IGIEDVEDLT DDLEQALSIL
|
|---|
| |