Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2532 |
Symbol | |
ID | 6410194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 2733298 |
End bp | 2734626 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642712410 |
Product | tetratricopeptide TPR_2 |
Protein accession | YP_001991520 |
Protein GI | 192290915 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.101624 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCGATTGA AGGCGACATG GTTGTGCGCT GTGGCGGCGA TGGTGATCGC CGGCGCGGCC GCGTCCGCGC AGGAGCAGAA GCCGACTCCC GCCGCGGTTG TGCAGCAGGG CTACGATGCG CTGTTCAACC AGATGTATCA GCAGCCGGCC AACCTCGACG TCAGCTTCAA ATTCGCCCAT GCGGCGGTCG AGCGCGGCGA CTACGAGGCC GCGATCGGCG CGCTGGAACG GATGCTGTTC TTCAATCCCG ATCTGCCGCG GGTGAAACTC GAACTCGGCG TGCTGTATTT CAAGCTCGCC TCCTACGAGA TCGCGCGCGG CTATCTGCTC GACGCGATCA AAGGCGGCAA CGTTCCAGAC GAAATCCGCG GCCAGGTGAT GGCGTATCTG TCCGAGATCG ACCGGCGGCT GTCCAAGCAC GAATACAGCG TGTTCATGCA GGGCGGCATG CGCTACCAGA CCAACGCCAA TATCGGGCCT AATTCGCTGC AGGTGCGCGC GCTCGGCCAG GATGCGATTC TCGATCCGCG GTTCGGCCGC AAGCCGGACT GGAACGCGTT CCAGAGCATC ACCGCCGCCT ACGCCTACAA GCTCAACATG CGCGGCGACG CGATCGAAAC CACCTTCCTC GGCTACAATT CGCGGCAGTT CACGCAGAGC CAGTTCAACC TCGGCCTGCT CGAAGGCACC ATCGGCCACC GCGTCGGGAT CGGCCAGAAC GCCTCGTTCA AATACTACGC GATCGGCGAC AAGGTCTGGC TCGGCGACTA CAGCTATTTC AGCGCGCTGG GCGGTGGTCT GTCGGCGCGC TCGGCGCTCG GCGATAACGG CCTGATCGAA GGCTATGTCG AAACGCGGCA CCGCAAGTTC ACCGACTCGA CCTACTACCC GACCGCCGGC ACCCAGACCG GCGACCTGAC GACCGCGGCG ATCACCACCG ACTTCCGGTT CGGTCCGGTG CATTGGACCA CGCGCGGCGG CTATGACGTC AACAAGGCGG TCGCCGACTA CAACAGCTAC AAGCGTTATT CGATCGACAT GGCGTTCCCG GTCGAATTCG TGGTGCCGGT GTTCGGCCAG CCGCATCAGT TCGTGGTGGC GCCGACCATC GGCTACAGCC GCTCGAACTA CGACGCGCCG AACTTCATCG TCGACCCGAC GCTGGCGCGG CGCGAGGACG AATATCGCTA CGGCGCCATC CTGGATGCGC AGATCGCCGG CAATGTCGGC GTGCGCACGC AGGTGATGTA CACCAAGATC GACTCCAACC TGCCGAACTA TCGCACCAAC AACCTGTCGG CCTCGCTCGG GCCGACGGTG CGTTTCTGA
|
Protein sequence | MRLKATWLCA VAAMVIAGAA ASAQEQKPTP AAVVQQGYDA LFNQMYQQPA NLDVSFKFAH AAVERGDYEA AIGALERMLF FNPDLPRVKL ELGVLYFKLA SYEIARGYLL DAIKGGNVPD EIRGQVMAYL SEIDRRLSKH EYSVFMQGGM RYQTNANIGP NSLQVRALGQ DAILDPRFGR KPDWNAFQSI TAAYAYKLNM RGDAIETTFL GYNSRQFTQS QFNLGLLEGT IGHRVGIGQN ASFKYYAIGD KVWLGDYSYF SALGGGLSAR SALGDNGLIE GYVETRHRKF TDSTYYPTAG TQTGDLTTAA ITTDFRFGPV HWTTRGGYDV NKAVADYNSY KRYSIDMAFP VEFVVPVFGQ PHQFVVAPTI GYSRSNYDAP NFIVDPTLAR REDEYRYGAI LDAQIAGNVG VRTQVMYTKI DSNLPNYRTN NLSASLGPTV RF
|
| |