Gene Rpal_2456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2456 
Symbol 
ID6410118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp2652068 
End bp2652754 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content67% 
IMG OID642712335 
ProductyecA family protein 
Protein accessionYP_001991445 
Protein GI192290840 
COG category[R] General function prediction only 
COG ID[COG3318] Predicted metal-binding protein related to the C-terminal domain of SecA 
TIGRFAM ID[TIGR02292] yecA family protein 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAAAT CAGCAAACTA TCTCGACAGA CTCGACGACG CGCTGGAGGC GCTCGGCCCC 
GATGCCATGC TGGTCGAGGA GCTCGACGGC TTCGTTGCCG GCCTGCTGCT GTGTCCCGAA
CCGATCAAGC CCGGCGACTG GCTGCCGACG GTCTGGCACA TCGGTAACGA CGCCTCGCCG
CTGACCGATC CCGCGCACGC CAACCACGTG TTCGCACTGA TCGTGCAGTA CTACAATTCC
GTCGCCCGCA CGCTGTCGGA CCACCCCGAG CGTTACCAGC CGCTGCTGCC GGTCGATCCC
GACAGCGGCG AATTGGTGTG GCAGGTCTGG ATCGACGGCT TCGCGGCAGC GACCGACCTG
CGGCCCGAGG CGTGGAGCCG CCTGGACGAT GCCGACGAAG CGACAGCGGC CGCGTTCGAC
GGGCTACTCG ATCTGATCGA GATCGCCGAC GCCGAGGCGG ACGCCGACGC GGACAGTCAG
CCAAGCGACC GCCCTGCGAT CACTGCGCCG AACTCCGACC AGATCGCCGG CTGGATCCTG
ACGCTGAACC GCTGGCGTAT CGCCCATGAC CCGGCGTCGC GCGAGATCGA ATGGGGACCG
CCCTCAGCGG CACGCAAAGT CGGCCGCAAC GACCCCTGCC CCTGCGGCTC GGGCAAGAAG
TACAAACGCT GCTGCGGGAT GACCTGA
 
Protein sequence
MAKSANYLDR LDDALEALGP DAMLVEELDG FVAGLLLCPE PIKPGDWLPT VWHIGNDASP 
LTDPAHANHV FALIVQYYNS VARTLSDHPE RYQPLLPVDP DSGELVWQVW IDGFAAATDL
RPEAWSRLDD ADEATAAAFD GLLDLIEIAD AEADADADSQ PSDRPAITAP NSDQIAGWIL
TLNRWRIAHD PASREIEWGP PSAARKVGRN DPCPCGSGKK YKRCCGMT