Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2456 |
Symbol | |
ID | 6410118 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 2652068 |
End bp | 2652754 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642712335 |
Product | yecA family protein |
Protein accession | YP_001991445 |
Protein GI | 192290840 |
COG category | [R] General function prediction only |
COG ID | [COG3318] Predicted metal-binding protein related to the C-terminal domain of SecA |
TIGRFAM ID | [TIGR02292] yecA family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAAAT CAGCAAACTA TCTCGACAGA CTCGACGACG CGCTGGAGGC GCTCGGCCCC GATGCCATGC TGGTCGAGGA GCTCGACGGC TTCGTTGCCG GCCTGCTGCT GTGTCCCGAA CCGATCAAGC CCGGCGACTG GCTGCCGACG GTCTGGCACA TCGGTAACGA CGCCTCGCCG CTGACCGATC CCGCGCACGC CAACCACGTG TTCGCACTGA TCGTGCAGTA CTACAATTCC GTCGCCCGCA CGCTGTCGGA CCACCCCGAG CGTTACCAGC CGCTGCTGCC GGTCGATCCC GACAGCGGCG AATTGGTGTG GCAGGTCTGG ATCGACGGCT TCGCGGCAGC GACCGACCTG CGGCCCGAGG CGTGGAGCCG CCTGGACGAT GCCGACGAAG CGACAGCGGC CGCGTTCGAC GGGCTACTCG ATCTGATCGA GATCGCCGAC GCCGAGGCGG ACGCCGACGC GGACAGTCAG CCAAGCGACC GCCCTGCGAT CACTGCGCCG AACTCCGACC AGATCGCCGG CTGGATCCTG ACGCTGAACC GCTGGCGTAT CGCCCATGAC CCGGCGTCGC GCGAGATCGA ATGGGGACCG CCCTCAGCGG CACGCAAAGT CGGCCGCAAC GACCCCTGCC CCTGCGGCTC GGGCAAGAAG TACAAACGCT GCTGCGGGAT GACCTGA
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Protein sequence | MAKSANYLDR LDDALEALGP DAMLVEELDG FVAGLLLCPE PIKPGDWLPT VWHIGNDASP LTDPAHANHV FALIVQYYNS VARTLSDHPE RYQPLLPVDP DSGELVWQVW IDGFAAATDL RPEAWSRLDD ADEATAAAFD GLLDLIEIAD AEADADADSQ PSDRPAITAP NSDQIAGWIL TLNRWRIAHD PASREIEWGP PSAARKVGRN DPCPCGSGKK YKRCCGMT
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