Gene Rpal_2392 details

Gene Information

• Locus tag: Rpal_2392
• ID: 6410054
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 2576531
• End bp: 2578411
• Gene Length: 1881 bp
• Protein Length: 626 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 642712271
• Product: Amidohydrolase 3
• Protein accession: YP_001991381
• Protein GI: 192290776
• COG category: [R] General function prediction only
• COG ID: [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.333971
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGACG CGCCGGACCT CATTCTGCAT CGCGGCCTGT TCACCACGCT CGACCGCTCG 
AACCCGACCG TGAGTGCGGT CGCCATCAGC GGCGGTCGTT TCAGCGCGGT GGGCCATGAC 
CGCGAGGTGC TGCCGCTGGC GGGGCCCTCG ACGAAAGTGA TCGATCTGAA GGGGCGGCGC 
GTGCTGCCCG GGCTGATCGA CAATCACCTG CACATCATCC GCGGCGGCCT GAACTTCAAC 
ATGGAGCTGC GCTGGGACGG CGTCCGTTCG CTGGCCGACG CCATGAACAT GCTGAAGCGC 
CAGGTCGCGA TCACGCCGCC GCCGCAATGG GTGCGCGTCG TCGGCGGCTT CACCGAGCAT 
CAGTTCGCCG AGAAGCGCTT GCCGACGATC GAGGAACTCA ATGCGGTGGC GCCGGACACG 
CCGGTGTTTC TGCTGCATCT GTATGACCGC GCGATCCTCA ACGGCGCTGC GCTGCGCGCC 
GTCGGCTACA CCAAGGACAC CCCGGAGCCG CCCGGCGGCG AGATCACGCG TGACGCCAAC 
GGCAATCCGA CCGGGCTGCT GCTCGCAAAG CCGAACGCCA ACATCCTCTA CGCGACGCTG 
GCGAAGGGCC CGAAGCTGCC GTTCGACTAT CAAGTCAATT CCACCCGCCA CTTCATGCGC 
GAGCTGAACC GGCTCGGCGT CACCGGCGCG ATCGACGCCG GCGGCGGCTT CCAGAATTAT 
CCCGACGATT ACGCGGTGAT CCAGAAGCTC GACGAGGAAG GCTTGCTGAC GATCCGGCTT 
GCCTACAATC TGTTTACTCA GAAGCCGAAG GGCGAGAAGG ACGACTTCCT CAACTGGACC 
AAGACCTCCA AATACAAGCA GGGAAACGAC TATTTCCGGC ACAACGGCGC CGGCGAGATG 
CTGGTGTTCT CAGCCGCCGA CTTCGAGGAT TTCCGCGTAC CACGCCCCGA CATGCCGCCG 
GAGATGGAAG GCGAGCTCGA GGAGGTGGTG CGCATCCTGG TGCAGAACAA ATGGCCGTGG 
CGTCTGCACG CGACCTATGA CGAGACTATC TCGCGCGCGC TCGACGTGTT CGAGAAGGTG 
AATCAGGATA CCCCGCTCGA CGGTCTGCAC TGGTTCTTCG ATCACGCCGA AACGATTTCG 
GACCGCTCGA TCGACCGCAT CGCCGCGCTC GGCGGCGGCA TCGCCGTGCA GCATCGGATG 
GCCTATCAGG GCGAGTATTT CGTCGAGCGC TACGGCTTCG GTGCCGCCGA GGCGACCCCG 
CCGGTGAAGC GGATTCTCGA CAGCGGCGTC AAGGTCTCGG CCGGTACCGA TGCGACCCGG 
GTCGCGTCTT ACAATCCGTG GGTGTCGCTC TCCTGGCTGG TGACCGGCCG CACCGTCGGC 
GGCCTGCGGA TCACTCCGCA GCGGAACTGC CTCGACCGCG AGACCGCGCT GCGGATGTGG 
ACGGAGAACG TCACCTGGTT CTCCAACGAG GAAGGCAATA AGGGGCGTGT CGCGGTCGGC 
CAGCTCGCCG ACGTGGTGGT GCCGGACCGC GACTACTTCT CGTGCAGTGA AGCCGAAATC 
GCCGATACGA CTTCGCTGCT GACGATGGTC GGTGGCAAGG TGGTGTATGG CGCCGGCGAG 
TTCGCCGGTC TTGACGACAG CGCGCCGCCT CCCGCCATGC CGGACTGGTC GCCGGTGCGC 
CGGTTCGGCG GCTATGCCGC CTGGGCGGAT GATGAAAGCG CTGCCGGCAA GGTCGCAGGG 
CAGGCCATGT CCTCTTGCGG CTGTGCCAAC AGCTGCACGC TGCATGGCCA CGACCACGCC 
ACCGCGTGGT CGAGCAAGTT GCCTGTGTCA GATCTCAAGA GCTTCTGGGG CGCGCTGGGC 
TGCGCTTGCT GGGCGGTGTG A 

 

Protein sequence

MTDAPDLILH RGLFTTLDRS NPTVSAVAIS GGRFSAVGHD REVLPLAGPS TKVIDLKGRR 
VLPGLIDNHL HIIRGGLNFN MELRWDGVRS LADAMNMLKR QVAITPPPQW VRVVGGFTEH 
QFAEKRLPTI EELNAVAPDT PVFLLHLYDR AILNGAALRA VGYTKDTPEP PGGEITRDAN 
GNPTGLLLAK PNANILYATL AKGPKLPFDY QVNSTRHFMR ELNRLGVTGA IDAGGGFQNY 
PDDYAVIQKL DEEGLLTIRL AYNLFTQKPK GEKDDFLNWT KTSKYKQGND YFRHNGAGEM 
LVFSAADFED FRVPRPDMPP EMEGELEEVV RILVQNKWPW RLHATYDETI SRALDVFEKV 
NQDTPLDGLH WFFDHAETIS DRSIDRIAAL GGGIAVQHRM AYQGEYFVER YGFGAAEATP 
PVKRILDSGV KVSAGTDATR VASYNPWVSL SWLVTGRTVG GLRITPQRNC LDRETALRMW 
TENVTWFSNE EGNKGRVAVG QLADVVVPDR DYFSCSEAEI ADTTSLLTMV GGKVVYGAGE 
FAGLDDSAPP PAMPDWSPVR RFGGYAAWAD DESAAGKVAG QAMSSCGCAN SCTLHGHDHA 
TAWSSKLPVS DLKSFWGALG CACWAV