Gene Rpal_2390 details

Gene Information

• Locus tag: Rpal_2390
• ID: 6410052
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 2575569
• End bp: 2576219
• Gene Length: 651 bp
• Protein Length: 216 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 642712269
• Product: isochorismatase hydrolase
• Protein accession: YP_001991379
• Protein GI: 192290774
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG1335] Amidases related to nicotinamidase

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.476269
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGAAAC TGGATATGCT CACGCCCGAG AACAGCGCGA TCGCGCTGAT CGATTATCAG 
CCGGCGATGT ATCAGGGCGT GCAGTCGCAC GACCGCCTTG TGGTGTTCAA CAATATCCAG 
ATCCTCGCCA AGGCGGCGAA GCTGTTCAAG ATTCCGACGG TGCTCACCAC GGTGGCCAAG 
GATTCGTTCT CCGGCCCGTT CATGCCGGAA GTCACCGAGC TGTTTCCGAA CCTCGACATC 
ATCGACCGCA CCTCGATGAA CTCGTGGCTC GACCCCAACT TCCGCAAGGC GGTCGCTGCT 
ACCGGGCGCA AGAAGTTCGT GATCGCGGGA CTGTGGACTG AAGCCTGCGT GATGTTCCCG 
ACGCTCGATA TGCTGAAGGA AGGCTACGAG ATCTACATCC CGGCCGATGC CTGCGGCGAT 
CTGTCGATGG AAGCGCACAA CCGCTCGATG GAGCGGGCGA TCCAGGCCGG CGCGGTGCCG 
ATCACTTCCT GCCAGTACGC GTTCGAACTG CAGCAGGACT GGGCGCGCTC GGAGACCTAT 
GAGGGCATGA TGGACATCCT GCGGGCGCAC TCGCCCTACG GCATCCAGAT CCGCTTCTCC 
AAGTGGGCGC TCGGCGAACA CGCCTCCGAA GGCGGCACCA AGGCCGCCTG A 

 

Protein sequence

MSKLDMLTPE NSAIALIDYQ PAMYQGVQSH DRLVVFNNIQ ILAKAAKLFK IPTVLTTVAK 
DSFSGPFMPE VTELFPNLDI IDRTSMNSWL DPNFRKAVAA TGRKKFVIAG LWTEACVMFP 
TLDMLKEGYE IYIPADACGD LSMEAHNRSM ERAIQAGAVP ITSCQYAFEL QQDWARSETY 
EGMMDILRAH SPYGIQIRFS KWALGEHASE GGTKAA