| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2345 |
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| Symbol | |
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| ID | 6410007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2530380 |
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| End bp | 2531375 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642712225 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001991335 |
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| Protein GI | 192290730 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAAC CGTTGATGTT GATCTGCGGT GCCGCCGCGA TGTTTGCGCT CGGCGCCGCT
GTTTCCGCTT ACGCGCCGAT CGGGTCGCGC GAGCCGGCGC AGCAGGCAGG AAAGGACCCG
AAGGGACATA ATCACGCTGC GGGCGAGAAG GGGCATGATC ACGGCGGCCA CGATGAGGAG
GGCGCGGTCG AGATGAGCGA CGCCAAGGTC GCGGCCTCGG GCATCGAGAT CCGCACCGCC
AAGGCCGAGA CGCTGCACGA GTCGCTGGTG CTCAACGGCA TCCTGCAGCC CAATCAGGAG
ACGCTGGTTC AAGTCACGCC GCGGTTCCCC GGCGTGGTGC GTGAGATCAG GAAGCGAATC
GGCGACACGG TCGAGAAGGG CGAGCTGCTC GCCAAGATCG AAAGCAATCA GAGCCTCAGC
GTGTACGAGA TGCGCGCGCC GATCTCCGGC ACCGTGATCG ACCGGCAGAT TTCGCTCGGC
GAATACGCGT CCGAACAGAA GCCGGCCTTT ACCGTTGCCG ACGTCTCCAC CGTGTGGGTC
GACCTGTCGG TGCATCGGCG CGATCTGCCG CGGGTGCGGA TCGGCGACAA GATTCTGATC
GACGTTGCCG ATGGCGGCCA GCCGATCGAG GCGAGTCTGT CCTACATCTC GCCGGTCGGC
AGCAGCGATA CCCAGAGCGC ACTCGCCCGC GCCGTGGTGC CAAACGACGC GATGCGCCTG
CGCTCCGGCC TGTTCGTATC GGCGCGATTG ATCCTCTCCG CCAAGCCGGT GCCGCTGGCG
GTGCGAGCCT CAGCAATCCA GACCGTCGAG AACCGCAGCG TGGTGTTCGT CCGCAGCGGC
GACAAGTTCG AGGTCCGCGA CGTCGAGCTC GGTGCACGGG ATGCAGAGAA CGTCGAGATC
GTGTTCGGCC TGCTCGACGG CGACCGCTAC GCCGCGGCTA ACAGCTTCGT CGTGAAGGCC
GAGCTCGGCA AGGGATCGGC GTCGCATGAG CACTAA
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| Protein sequence | MMKPLMLICG AAAMFALGAA VSAYAPIGSR EPAQQAGKDP KGHNHAAGEK GHDHGGHDEE
GAVEMSDAKV AASGIEIRTA KAETLHESLV LNGILQPNQE TLVQVTPRFP GVVREIRKRI
GDTVEKGELL AKIESNQSLS VYEMRAPISG TVIDRQISLG EYASEQKPAF TVADVSTVWV
DLSVHRRDLP RVRIGDKILI DVADGGQPIE ASLSYISPVG SSDTQSALAR AVVPNDAMRL
RSGLFVSARL ILSAKPVPLA VRASAIQTVE NRSVVFVRSG DKFEVRDVEL GARDAENVEI
VFGLLDGDRY AAANSFVVKA ELGKGSASHE H
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