| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2262 |
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| Symbol | |
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| ID | 6409922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2454410 |
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| End bp | 2455735 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642712146 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_001991258 |
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| Protein GI | 192290653 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACCG CAATCATCTT CGGGCTTCTC ATCGCCCTGA TGCTGACCGG CATGCCGATC
TCGATCGCGC TCGGTCTCAC CGTGCTGTCG TTCGTCGTGC TGATGACCAA CGTGCCGATG
GAAGCGGTGT CGTTGAAGCT GTTCACCGGC ATCGAGAATT TCGAGATCAT GGCGATCCCG
TTCTTCATCC TCGCCGGCAA CTTCCTGACC CACGGCGGCG TCGCCCGCCG TATGATCAAC
TTCGCCACCA CCATGGTCGG GCACTGGTAC GGCGGCCTCG GTCTCGCCGG CGTGATGGCC
TGCGCGCTGT TCGCGGCGGT CTCGGGTTCC TCGCCCGCGA CCGTGATTGC GATCGGCTCG
ATCATGCTGC CGGCGATGGT GAAGCAGGGC TTCCCGAAGC GGTTCGGCGC CGGCGTCATC
ACCACCTCCG GCGCGCTCGG CATCCTGATC CCGCCGTCGA TCGTGATGGT GGTGTATGCG
GTGGCGACCG GCGGCTCGAT CGCGCTCGAT CCGGACGGAA ACCGCGTGTC GTCGGCTTCG
GTCGGTCAGC TGTTCATGGC CGGCGTCATT CCCGGCATCA TGCTGGCATC GCTGCTCGGC
CTCACCACCT TCTACCGCGC CTGGAAGAAC GACTATCCGC GTCTGCCGAA GGCGAGCTGG
GCGGAGCGGT TCGACGCGTT CCGCAAGTGC ATTTGGGGCC TATTGCTGAT CGTGATCGTG
CTCGGCGGTA TCTATGCCGG CATGTTTACG CCGACCGAAG CGGCGGCGAT CAGTGCGGTG
TACGCCTTTA TCATCGCGGT GTTCGTTTAT CGCGACATGG GCCTGCGGGA CGTGCCGCGG
GTGCTGCTCG GCTCGGCGAA CATGAGCGCG ATGATCCTCT ACATCATCAC CAACGCCGTG
CTGTTCTCGT TCCTGATGGC CAACGAAAAC ATCCCGCAAC AGATCGCGAG CTGGATGTCG
ACTGCGGGCG TGAATTGGGT CTGGTTCCTG CTCGTGGTTA ACATCCTGCT GCTGCTCGCC
GGCAACGTGA TGGAAGCGAC CTCGATCGTG TTGATCATGG CGCCGATCCT GTTCCCGGTG
GCGGTGAAGC TCGGCATTCA CCCGGTCCAT CTCGGTATCC TGATGGTGGT GAACATGGAG
GTCGGCATGT GTCACCCGCC GGTCGGCCTC AACCTCTACG TCGCGTCCGG CATCGCCAAA
ATGGGCATTA CCGAGCTGAC GGTGGCGGTA ATGCCGTGGC TGCTCACCAT GCTGGCGTTC
CTGGCGTTGG TGACTTACGT GCCGGAGATT TCGCTGTGGC TGCCGCGCAT GCTCGGCATG
TTGTAG
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| Protein sequence | MNTAIIFGLL IALMLTGMPI SIALGLTVLS FVVLMTNVPM EAVSLKLFTG IENFEIMAIP
FFILAGNFLT HGGVARRMIN FATTMVGHWY GGLGLAGVMA CALFAAVSGS SPATVIAIGS
IMLPAMVKQG FPKRFGAGVI TTSGALGILI PPSIVMVVYA VATGGSIALD PDGNRVSSAS
VGQLFMAGVI PGIMLASLLG LTTFYRAWKN DYPRLPKASW AERFDAFRKC IWGLLLIVIV
LGGIYAGMFT PTEAAAISAV YAFIIAVFVY RDMGLRDVPR VLLGSANMSA MILYIITNAV
LFSFLMANEN IPQQIASWMS TAGVNWVWFL LVVNILLLLA GNVMEATSIV LIMAPILFPV
AVKLGIHPVH LGILMVVNME VGMCHPPVGL NLYVASGIAK MGITELTVAV MPWLLTMLAF
LALVTYVPEI SLWLPRMLGM L
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