| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2259 |
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| Symbol | |
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| ID | 6409919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2450888 |
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| End bp | 2452462 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642712143 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_001991255 |
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| Protein GI | 192290650 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.044795 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACCA CCACCCAGTC CGAACAGGAC CGCGTCATCA TTTTCGACAC CACCTTGCGC
GACGGCGAGC AGTGCCCCGG CGCCACCATG ACGTTCGAGG AGAAGCTGAA CGTCGCCCGG
ATGCTCGACG ACATGGGTGT CGACGTGATC GAGGCCGGCT ACCCGTTCGC CTCCGATGGT
GATTTCGAAG CGGTGCACGA GATCGCTAAG CGTTCGAAGA ATTCGGTGAT TTGCGGTTTG
TCGCGCGCCG CCCACAAGGA CATCGACCGC TGCGCCGAGG CGATCAAGCC GGCCGAGCGC
GGCCGCATCC ACACCTTCCT GTCCACCTCG CCGGTGCACA TGAAGTACAA GCTGCAGATG
GAAGCCGCGC AGGTCTACGA GATGGTGATC TCGTCGGTGA CGCGCGCGCG CAACCATACC
GACGACGTCG AGTGGTCGGC CGAGGACGCC ACCCGCACCG AGTTCGACTT CCTGTGCCGC
TGCATCGAGG CCGCGATCAA GGCCGGCGCG ACCACCATCA ATCTGCCGGA CACCGTCGGC
TACGCGGTGC CGGAGGAATA TCGTGAGCTG TTCCGCAAGG TTCGCGAGAC GGTGCCAAAT
TCCGACAAGG CGCGGTTCTC GGTCCACTGC CATAACGACC TGGGCATGGC GGTCGCAAAT
TCGATGGCCG GCGTCGCCGG CGGCGCGCGC CAGATCGAAT GCACCATCAA CGGCATCGGC
GAGCGCGCTG GTAACGCCGC CTTGGAAGAG GTGGTGATGG CGATGCGGGT GCGGCAGGAC
AAGTTGCCGT ACTGGAACCG GATCGAGACG ACAATGCTGA CTCACGCCTC GAAGACGGTG
TCGGCCGCGA CCTCGTTCCC GGTCCAGTAC AACAAGGCGA TCGTAGGCCG GAACGCGTTT
GCGCACGAGA GCGGCATCCA CCAGGACGGC ATGATCAAGA ACGCCCAGAC CTACGAGATC
ATGACCCCGG AGACGGTGGG CGTGAAGGGC ACCTCGCTGG TGATGGGTAA GCACTCCGGC
CGCGCCGGCT TGATCCACAA GATGGAAGAG CTGGGCTACA AGCTGTCGCG CAACCAGATC
GAGGACGTGT TCGTGCGGTT CAAGGCCTTG GCCGACCGCA AGAAGGACGT CTACGACGAG
GACATCGAGG CGCTGGTCGA CGAGCAACTG CTGCACGGCC AGGACCAGAT CAAGCTGATG
TCCTTGACGG TGATCGCCGG TACCCACGGC CCGCAGCGCG CCACCATGAA GCTGGACGTC
GACGGCCAGA TCCGGATCGA GGAAGCCGAA GGCAATGGCC CGGTGGATGC GGTGTTCAAC
TGCATCAAGG CGCTGGTGCC GCACGATGCC AAGCTGGAAC TGTATCAGGT CCATGCCGTC
ACCGAGGGCA CCGACGCGCA GGCGGAAGTG TCGGTTCGGC TGAGCCATGA AGGCCGCTCG
ATGACCGCGC GCGCGGCCGA TCCCGACACC TTGGTGGCGT CGGCGAAGGC TTACCTGGGC
GCGCTCAACA AGATCGTCGC CAAGCGTCAG CGTAGCGTTC GCGAAGATGC GCCGACGGTG
GCGGTCGCCG GCTGA
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| Protein sequence | MTTTTQSEQD RVIIFDTTLR DGEQCPGATM TFEEKLNVAR MLDDMGVDVI EAGYPFASDG
DFEAVHEIAK RSKNSVICGL SRAAHKDIDR CAEAIKPAER GRIHTFLSTS PVHMKYKLQM
EAAQVYEMVI SSVTRARNHT DDVEWSAEDA TRTEFDFLCR CIEAAIKAGA TTINLPDTVG
YAVPEEYREL FRKVRETVPN SDKARFSVHC HNDLGMAVAN SMAGVAGGAR QIECTINGIG
ERAGNAALEE VVMAMRVRQD KLPYWNRIET TMLTHASKTV SAATSFPVQY NKAIVGRNAF
AHESGIHQDG MIKNAQTYEI MTPETVGVKG TSLVMGKHSG RAGLIHKMEE LGYKLSRNQI
EDVFVRFKAL ADRKKDVYDE DIEALVDEQL LHGQDQIKLM SLTVIAGTHG PQRATMKLDV
DGQIRIEEAE GNGPVDAVFN CIKALVPHDA KLELYQVHAV TEGTDAQAEV SVRLSHEGRS
MTARAADPDT LVASAKAYLG ALNKIVAKRQ RSVREDAPTV AVAG
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