| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2248 |
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| Symbol | |
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| ID | 6409908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2439209 |
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| End bp | 2440441 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642712132 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_001991244 |
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| Protein GI | 192290639 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTATGA CGACGACTTC CGTGGCCGCA CTCGCGGCTG CGATCGCGAT GCTGGCCGCA
GGGCCGGCGC TCGCTCAGAA GAAGTACGGC CCCGGCGCCA GCGACACCGA GATCAAGCTC
GGCAACACCG TGCCGTACAG CGGCCCGGCC TCGGCCTACG GCATCCTCGG CAAGACCTAC
GCGGCGTACT TCAAGAAGAT CAACGAAGAA GGCGGCATCA ACGGCCGCAA GATCAATGTG
ATCTCCTATG ACGATGCGTA CTCGCCGCCG AAGACGGTCG AACAGACCCG CAAGCTGGTC
GAGAGCGACG AGGTGATGGC GATCGTCGGT AACGTCGGCA CCGCGTCGAA CGTCGCGATC
CAGAAGTATC TCAACGCCCG CAAAGTCCCG CAGCTGTTCC TCGCCACCGG TGCGACCCGC
TGGAACGATC CGAAGCAGTT CCCGTGGACC ATGGGCTGGC TGCCGAGCTA TCAGGCCGAA
GCCACCGCCT ACGCCAAGTA CCTGTTGAAG GAGAAGCCGA ACGCCAAGAT CGGCGTGCTC
TATCAGAACG ATGATTTCGG CAAGGACTAC ATTCGCGGTT TGAAGGAAGG GCTGGGCGAC
AAGGCCGCGT CGATGATGGT GGCGGAAGCG AGCTACGAAG TCGCCGAGCC GACCATCGAC
TCGCAGATCG TCAAGCTCAA GGCGTCCGGC GCCGACACGC TGTTCTCGTT CGCCACCGGC
AAGTTCGCTG CGCAGTCGAT CAAGAAGGTG GCCGAACTCG GCTGGAAGCC GCTGCACATC
GTACCCAATG CCTCGTCGTC GCTCGGCACC GTGCTGAAGC CGGCCGGCCT CGAGAACGCG
CAGGATCTGG TGTCCGCGAC CTTCGCAAAG GACCCGACCG ATCCGCAGTG GAACGACGAC
CCCGGCATGA AGAAATTCCA TGCTTTCGTC GAAAAATACA TTCCCGAAGG CAAGGCGATG
GAAAGCACGG TGCTGTCCGG CTACAGCATC GCTCAGACCA TGGAGCAGGC GCTCAGGATG
TGCGGCGACG ATCTGTCCCG CGAGAACCTG ATGAAGCAGG CGGCCAGTAT GAAGGGCGTA
CAGCTTGACG GTCTCTTGCC GGGCGTCACC GTCAACACCT CGCCGACCGA CTTCGCGCCG
ATCGATCAGT TCCAGATGAT GACCTTCAAG GGCGAACGCT GGCAGCGCTT CGGTGACGTC
ATCAAGGGCG AAGTGGCCGA AGCGGGGCGG TAA
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| Protein sequence | MRMTTTSVAA LAAAIAMLAA GPALAQKKYG PGASDTEIKL GNTVPYSGPA SAYGILGKTY
AAYFKKINEE GGINGRKINV ISYDDAYSPP KTVEQTRKLV ESDEVMAIVG NVGTASNVAI
QKYLNARKVP QLFLATGATR WNDPKQFPWT MGWLPSYQAE ATAYAKYLLK EKPNAKIGVL
YQNDDFGKDY IRGLKEGLGD KAASMMVAEA SYEVAEPTID SQIVKLKASG ADTLFSFATG
KFAAQSIKKV AELGWKPLHI VPNASSSLGT VLKPAGLENA QDLVSATFAK DPTDPQWNDD
PGMKKFHAFV EKYIPEGKAM ESTVLSGYSI AQTMEQALRM CGDDLSRENL MKQAASMKGV
QLDGLLPGVT VNTSPTDFAP IDQFQMMTFK GERWQRFGDV IKGEVAEAGR
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