| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2229 |
|---|
| Symbol | |
|---|
| ID | 6409889 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 2419070 |
|---|
| End bp | 2420092 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642712113 |
|---|
| Product | Alcohol dehydrogenase zinc-binding domain protein |
|---|
| Protein accession | YP_001991225 |
|---|
| Protein GI | 192290620 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCGC TCACCCTCGT TGCCGACCGC AATCTCGTGG TCGCCGACCT GCCGTCTCCC
CCGTCCCCGG CGGCCGGCGA GGTGCAGGTC CGCATCGCCG CAGTGGCGCT GAACCACATC
GACGTGTGGG GCTATCGCGG CATGGCCTTC GTCAAGCGCA AGCTGCCGAT CGTGGTCGGC
GCCGAAGCCT CCGGCACGAT CGAAGCGGTC GGCGACGGCG TCACCACCTT TAAGCCCGGC
CAGAAGGTCG TGATGTACGG CGCGCTGACC TGCGGCCACT GCAAGGCGTG CCAGGAAGGC
CGCGACAATC TCTGCGAAAA CGTCGGCGGC CTGATCGGCT TCCATGTCGA CGGCTTCGCG
CGCGAGCTGA TGAACATCGC GGCGCGGCTT GTGATCCCGG TGCCGGACGC CGTCGACCTG
CGCGATGCCG CCTGCGCGCC GATCGCCTTC TCGACCGTGC AGCACATGCT GTTCGACAAT
GCCAAGCTGC AGCCCGGCGA GACCGTGCTC GTCCATGCCG GCGGCTCCGG CATCGGCACT
GTAGCGATCA TGATGGCCAA GGCGATCGGC TGCACGGTGA TCACCACCGT CGGCGATGAT
TCCAAGATCG AGGGCGTCAA GAAGCTCGGC GCCGATCACG TCATCAACTA TCGCCAGGAT
CGCTTCGAGC ACGAGTGCCG CAAGATCACC AAGAAGAAGG GTGTCGACGT GGTGTTCGAA
CACGTCGGTG CCGACACTTT CAACGGCTCG CTGCTCAGCT TGAAGCGCGG CGGCCGGCTG
GTGACCTGCG GCTCGACCTC GGGCCCGACC ACCACCCTTA ACCTGATGCA GCTGTTCCAG
CAGCAGTACA AGATCTTCGG CTCGTTCGGC GCGACGATGA AGAACATCGC CGAAAGCCTC
GATAAGATGG CTGCCGGGAT GCTGCCGGTG ATCGACACCG AAGTGCCGCT CGACGATGTC
GGTGCGGCGC TGAAGCGTAT GGAAAGCCGC CAGGTGTTCG GCAAGATCAT CGTCCGGTTC
TGA
|
|---|
| Protein sequence | MRALTLVADR NLVVADLPSP PSPAAGEVQV RIAAVALNHI DVWGYRGMAF VKRKLPIVVG
AEASGTIEAV GDGVTTFKPG QKVVMYGALT CGHCKACQEG RDNLCENVGG LIGFHVDGFA
RELMNIAARL VIPVPDAVDL RDAACAPIAF STVQHMLFDN AKLQPGETVL VHAGGSGIGT
VAIMMAKAIG CTVITTVGDD SKIEGVKKLG ADHVINYRQD RFEHECRKIT KKKGVDVVFE
HVGADTFNGS LLSLKRGGRL VTCGSTSGPT TTLNLMQLFQ QQYKIFGSFG ATMKNIAESL
DKMAAGMLPV IDTEVPLDDV GAALKRMESR QVFGKIIVRF
|
|---|
| |